Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 RNU6-225P-201ENST00000384613 103 ntBASIC4.19□□□□□ -1.74
LTBQ06643 DEFB108C-201ENST00000400154 252 ntBASIC4.19□□□□□ -1.74
LTBQ06643 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 RN7SKP106-201ENST00000410832 272 ntBASIC4.19□□□□□ -1.74
LTBQ06643 RN7SKP142-201ENST00000411236 328 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC022028.1-201ENST00000412054 408 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC140479.3-201ENST00000418944 1126 ntBASIC4.19□□□□□ -1.74
LTBQ06643 MRPS36P1-201ENST00000421291 307 ntBASIC4.19□□□□□ -1.74
LTBQ06643 Z74021.1-201ENST00000423610 407 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AL590103.1-201ENST00000434488 307 ntBASIC4.19□□□□□ -1.74
LTBQ06643 PPIAP13-201ENST00000434706 478 ntBASIC4.19□□□□□ -1.74
LTBQ06643 MTND1P4-201ENST00000435196 415 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC093155.1-201ENST00000440164 826 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 COX6CP18-201ENST00000448769 222 ntBASIC4.19□□□□□ -1.74
LTBQ06643 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 KATNBL1P6-201ENST00000453433 915 ntBASIC4.19□□□□□ -1.74
LTBQ06643 RNU6-956P-201ENST00000458868 103 ntBASIC4.19□□□□□ -1.74
LTBQ06643 RPL5P24-201ENST00000463742 885 ntBASIC4.19□□□□□ -1.74
LTBQ06643 RPL7P1-201ENST00000468161 747 ntBASIC4.19□□□□□ -1.74
LTBQ06643 RPL7P9-201ENST00000468715 747 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC109327.1-201ENST00000471666 403 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC022795.1-201ENST00000473808 480 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC025164.1-201ENST00000496249 478 ntBASIC4.19□□□□□ -1.74
LTBQ06643 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
LTBQ06643 DYNLL1P6-201ENST00000503440 264 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 snoU109.6-201ENST00000516831 118 ntBASIC4.19□□□□□ -1.74
LTBQ06643 RNU6-678P-201ENST00000516832 109 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 AC106038.2-201ENST00000520706 568 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 AP002963.1-201ENST00000530590 184 ntBASIC4.19□□□□□ -1.74
LTBQ06643 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC007954.1-201ENST00000554198 494 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 AL137072.1-201ENST00000603444 466 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC015540.1-201ENST00000615828 501 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBQ06643 AC011944.2-201ENST00000624440 683 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC006927.3-201ENST00000638789 384 ntBASIC4.19□□□□□ -1.74
LTBQ06643 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBQ06643 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LTBQ06643 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBQ06643 AC109315.1-201ENST00000584143 1347 ntBASIC4.19□□□□□ -1.74
LTBQ06643 AC017104.4-201ENST00000636283 1592 ntBASIC4.19□□□□□ -1.74
LTBQ06643 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 AC092079.1-201ENST00000558620 1985 ntBASIC4.18□□□□□ -1.74
LTBQ06643 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
LTBQ06643 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LTBQ06643 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 RNU6-500P-201ENST00000362349 107 ntBASIC4.18□□□□□ -1.74
LTBQ06643 RNA5SP447-201ENST00000363749 119 ntBASIC4.18□□□□□ -1.74
LTBQ06643 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBQ06643 RNU6-1215P-201ENST00000384441 102 ntBASIC4.18□□□□□ -1.74
LTBQ06643 RNA5SP372-201ENST00000390836 115 ntBASIC4.18□□□□□ -1.74
LTBQ06643 SNORA11.1-201ENST00000408133 129 ntBASIC4.18□□□□□ -1.74
LTBQ06643 AL663109.1-201ENST00000411498 844 ntBASIC4.18□□□□□ -1.74
LTBQ06643 TPMTP3-201ENST00000411928 735 ntBASIC4.18□□□□□ -1.74
LTBQ06643 PGBD4P8-201ENST00000412993 562 ntBASIC4.18□□□□□ -1.74
LTBQ06643 RPL21P108-201ENST00000413857 481 ntBASIC4.18□□□□□ -1.74
LTBQ06643 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.18□□□□□ -1.74
LTBQ06643 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.18□□□□□ -1.74
LTBQ06643 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.18□□□□□ -1.74
LTBQ06643 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.18□□□□□ -1.74
LTBQ06643 H2AFZP5-201ENST00000446960 382 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms