Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNA5SP107-201ENST00000411358 122 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 RANP4-201ENST00000413361 655 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 RPS27AP12-201ENST00000429552 465 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN12P56749 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 HMGB1P48-201ENST00000446155 598 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN12P56749 AL513343.1-201ENST00000451818 792 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN12P56749 HMGN1P18-201ENST00000457642 277 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN12P56749 NCOR1P1-202ENST00000486162 291 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC092185.1-201ENST00000491371 97 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 SETP14-201ENST00000497538 873 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC021146.5-201ENST00000503544 545 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN12P56749 AC093770.1-201ENST00000511559 571 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN12P56749 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.03□□□□□ -1.92
CLDN12P56749 RNA5SP315-201ENST00000516340 116 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 RNA5SP312-201ENST00000517068 116 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 AC034205.1-201ENST00000520621 638 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 IGHV3-76-201ENST00000522465 295 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AP000926.4-201ENST00000527351 454 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN12P56749 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN12P56749 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN12P56749 SNRPGP15-201ENST00000600149 222 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 RNU1-30P-201ENST00000606575 163 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AC005962.2-201ENST00000611427 652 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 AL136164.4-201ENST00000625013 2135 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN12P56749 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.03□□□□□ -1.92
CLDN12P56749 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CLDN12P56749 AC058791.1-201ENST00000608412 3198 ntBASIC3.03□□□□□ -1.92
CLDN12P56749 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN12P56749 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN12P56749 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN12P56749 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN12P56749 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.93
CLDN12P56749 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CLDN12P56749 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN12P56749 AC007496.3-201ENST00000624987 3443 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN12P56749 AC010733.2-201ENST00000589496 5702 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN12P56749 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN12P56749 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN12P56749 RNU1-32P-201ENST00000363937 159 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 MIR421-201ENST00000365696 85 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.02□□□□□ -1.93
CLDN12P56749 RNU2-71P-201ENST00000411395 189 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 OR8F1P-201ENST00000425243 930 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN12P56749 RPL23AP82-202ENST00000427528 469 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AL117339.2-201ENST00000430475 180 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AL662791.1-201ENST00000441992 928 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN12P56749 HMGN2P16-201ENST00000456802 261 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 CENPBD1P1-201ENST00000464061 469 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 RN7SL594P-201ENST00000470590 287 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC025459.1-201ENST00000504072 156 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN12P56749 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN12P56749 CYCSP30-201ENST00000546447 172 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN12P56749 TRAV37-201ENST00000553906 342 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC011468.4-201ENST00000603942 409 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC005344.1-201ENST00000613391 459 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN12P56749 U4.6-201ENST00000621618 127 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC016717.3-201ENST00000624730 554 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC119674.1-220ENST00000641502 1048 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AC002546.1-201ENST00000588041 2504 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN12P56749 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN12P56749 HSPA8P19-201ENST00000505359 1517 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AP004289.2-201ENST00000444413 1457 ntBASIC3.02□□□□□ -1.93
CLDN12P56749 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN12P56749 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN12P56749 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
CLDN12P56749 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN12P56749 FRG1CP-201ENST00000358464 769 ntBASIC3.01□□□□□ -1.93
CLDN12P56749 RNU6-335P-201ENST00000364563 113 ntBASIC3.01□□□□□ -1.93
CLDN12P56749 SNORA62-201ENST00000365493 153 ntBASIC3.01□□□□□ -1.93
CLDN12P56749 RNU6-805P-201ENST00000365643 106 ntBASIC3.01□□□□□ -1.93
CLDN12P56749 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN12P56749 RNA5SP293-201ENST00000410527 113 ntBASIC3.01□□□□□ -1.93
CLDN12P56749 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN12P56749 AC093578.1-201ENST00000415219 368 ntBASIC3.01□□□□□ -1.93
CLDN12P56749 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN12P56749 AP000907.1-201ENST00000428428 510 ntBASIC3.01□□□□□ -1.93
CLDN12P56749 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms