Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC010655.1-201ENST00000449336 292 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 UBDP1-202ENST00000457888 382 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 NDUFA5P9-201ENST00000472609 340 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX1P55347 HPRT1P1-201ENST00000509498 657 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC010306.1-201ENST00000523223 1117 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 RNU6-156P-201ENST00000621869 107 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX1P55347 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PKNOX1P55347 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 ASNSP1-204ENST00000641977 1664 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX1P55347 PWAR6-201ENST00000552334 4618 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 RPL32P3-201ENST00000359025 275 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PKNOX1P55347 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 PTMAP5-201ENST00000393073 333 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AL590704.1-201ENST00000402856 794 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX1P55347 RNU2-21P-201ENST00000410368 188 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AL158071.1-201ENST00000430315 461 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 OR4C10P-201ENST00000434991 931 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.54□□□□□ -1.84
PKNOX1P55347 FABP5P3-201ENST00000437960 408 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX1P55347 TVP23BP2-201ENST00000455082 615 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 RPS20P21-201ENST00000466859 343 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 CYCSP20-201ENST00000473154 315 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC078785.3-201ENST00000476607 425 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC126121.1-201ENST00000482313 553 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 ACTG1P13-201ENST00000486987 1043 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.54□□□□□ -1.84
PKNOX1P55347 Vault.1-201ENST00000516474 102 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.54□□□□□ -1.84
PKNOX1P55347 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 MIR4700-201ENST00000578311 74 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC087499.8-201ENST00000578406 226 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 MIR5187-201ENST00000583479 76 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.54□□□□□ -1.84
PKNOX1P55347 AL512506.1-201ENST00000613918 449 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC073569.3-201ENST00000619055 682 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 MIR6758-201ENST00000620653 63 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AL354798.1-201ENST00000622505 329 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AC097372.4-201ENST00000625025 466 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.54□□□□□ -1.84
PKNOX1P55347 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX1P55347 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PKNOX1P55347 NMD3P1-201ENST00000439704 1488 ntBASIC3.54□□□□□ -1.84
PKNOX1P55347 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PKNOX1P55347 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 SEC63P2-201ENST00000503863 1939 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 RNA5SP235-201ENST00000365411 114 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms