Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC004908.3-201ENST00000610248 625 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC243756.2-201ENST00000618406 463 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC022509.4-201ENST00000621404 572 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC073348.1-201ENST00000623002 331 ntBASIC3.93□□□□□ -1.78
CDH11P55287 MIR6830-201ENST00000636015 70 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AF001550.2-201ENST00000636643 217 ntBASIC3.93□□□□□ -1.78
CDH11P55287 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CDH11P55287 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH11P55287 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH11P55287 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH11P55287 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 Z82217.1-201ENST00000625157 8149 ntBASIC3.92□□□□□ -1.78
CDH11P55287 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH11P55287 RNA5SP513-201ENST00000364648 118 ntBASIC3.92□□□□□ -1.78
CDH11P55287 SUGT1P1-201ENST00000379514 476 ntBASIC3.92□□□□□ -1.78
CDH11P55287 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 Y_RNA.465-201ENST00000384293 102 ntBASIC3.92□□□□□ -1.78
CDH11P55287 MIR659-201ENST00000384963 97 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AL049545.1-201ENST00000401856 572 ntBASIC3.92□□□□□ -1.78
CDH11P55287 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 PRELID3BP11-201ENST00000414230 479 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AL161449.1-201ENST00000414531 1199 ntBASIC3.92□□□□□ -1.78
CDH11P55287 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 AL356387.2-201ENST00000422272 243 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AL592293.2-201ENST00000422292 996 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 GTF2IP23-201ENST00000423746 351 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 USP9YP11-201ENST00000427537 717 ntBASIC3.92□□□□□ -1.78
CDH11P55287 MTND1P32-201ENST00000433043 938 ntBASIC3.92□□□□□ -1.78
CDH11P55287 CBX1P1-201ENST00000440184 427 ntBASIC3.92□□□□□ -1.78
CDH11P55287 HMGB1P48-201ENST00000446155 598 ntBASIC3.92□□□□□ -1.78
CDH11P55287 EXTL2P1-201ENST00000446218 416 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 PNPLA4P1-201ENST00000458328 305 ntBASIC3.92□□□□□ -1.78
CDH11P55287 RN7SL585P-201ENST00000470538 280 ntBASIC3.92□□□□□ -1.78
CDH11P55287 FTH1P24-201ENST00000503502 462 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AC108145.1-201ENST00000503770 153 ntBASIC3.92□□□□□ -1.78
CDH11P55287 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 AC104090.1-201ENST00000506341 1171 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AC018797.3-201ENST00000513388 1241 ntBASIC3.92□□□□□ -1.78
CDH11P55287 HNRNPKP5-201ENST00000515300 253 ntBASIC3.92□□□□□ -1.78
CDH11P55287 RN7SKP122-201ENST00000515923 296 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 PDCL2P2-201ENST00000533651 189 ntBASIC3.92□□□□□ -1.78
CDH11P55287 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH11P55287 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH11P55287 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH11P55287 MRPS36P5-201ENST00000551909 298 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AC087465.1-201ENST00000560574 245 ntBASIC3.92□□□□□ -1.78
CDH11P55287 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH11P55287 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 KPNA2P3-201ENST00000584190 848 ntBASIC3.92□□□□□ -1.78
CDH11P55287 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 MRPS35P3-201ENST00000603189 709 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AL139344.1-201ENST00000605228 195 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 DBF4P1-201ENST00000412976 1892 ntBASIC3.92□□□□□ -1.78
CDH11P55287 AC109315.1-201ENST00000584143 1347 ntBASIC3.92□□□□□ -1.78
CDH11P55287 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CDH11P55287 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH11P55287 LINC02471-203ENST00000641941 4752 ntBASIC3.91□□□□□ -1.78
CDH11P55287 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH11P55287 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH11P55287 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 FAM133CP-201ENST00000332869 704 ntBASIC3.91□□□□□ -1.78
CDH11P55287 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH11P55287 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH11P55287 AC068538.1-201ENST00000376856 336 ntBASIC3.91□□□□□ -1.78
CDH11P55287 RNU6-157P-201ENST00000383957 107 ntBASIC3.91□□□□□ -1.78
CDH11P55287 RNU6-1300P-201ENST00000391046 108 ntBASIC3.91□□□□□ -1.78
CDH11P55287 SNORD66.1-201ENST00000391230 76 ntBASIC3.91□□□□□ -1.78
CDH11P55287 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH11P55287 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.91□□□□□ -1.78
CDH11P55287 FCF1P2-201ENST00000415284 583 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms