Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC106858.1-201ENST00000637497 429 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
HMGCS2P54868 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS2P54868 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS2P54868 SNORA48.5-201ENST00000391143 135 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 JKAMPP1-201ENST00000413804 919 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.04□□□□□ -1.76
HMGCS2P54868 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS2P54868 BX119904.1-201ENST00000432026 348 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS2P54868 AC004069.2-201ENST00000505438 1114 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 PHBP14-201ENST00000512887 367 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 RNU1-103P-201ENST00000516502 125 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 RNU6-579P-201ENST00000516879 102 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS2P54868 AC019227.1-201ENST00000526902 510 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS2P54868 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS2P54868 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS2P54868 AC015911.5-201ENST00000587076 451 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS2P54868 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGCS2P54868 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS2P54868 FRG1DP-201ENST00000635586 771 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 AL732372.2-225ENST00000642124 456 ntBASIC4.04□□□□□ -1.76
HMGCS2P54868 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HMGCS2P54868 BDP1P-201ENST00000582658 1990 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS2P54868 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS2P54868 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HMGCS2P54868 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 RNU6-609P-201ENST00000365459 107 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 SEC63P1-201ENST00000425785 1258 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 UBE2D3P3-201ENST00000426992 425 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 NPM1P24-201ENST00000428039 894 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 ATP5HP2-201ENST00000433885 485 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 AL512661.1-201ENST00000434586 1253 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 AC092809.1-201ENST00000441469 474 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 RNFT1P2-201ENST00000443064 757 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 AC005229.2-201ENST00000456995 399 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 NPM1P17-201ENST00000479221 602 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGCS2P54868 AC104629.1-201ENST00000494226 508 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
HMGCS2P54868 AC109458.1-201ENST00000508858 316 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 AC119751.5-201ENST00000514077 770 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS2P54868 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS2P54868 MIR5680-201ENST00000577577 84 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 AC139769.3-201ENST00000618383 175 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 HSPA8P19-201ENST00000505359 1517 ntBASIC4.03□□□□□ -1.76
HMGCS2P54868 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HMGCS2P54868 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS2P54868 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
HMGCS2P54868 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGCS2P54868 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HMGCS2P54868 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGCS2P54868 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HMGCS2P54868 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HMGCS2P54868 RNA5SP374-201ENST00000362939 125 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms