Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.83□□□□□ -1.64
COPAP53621 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
COPAP53621 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.83□□□□□ -1.64
COPAP53621 RPL18P10-201ENST00000425606 538 ntBASIC4.83□□□□□ -1.64
COPAP53621 RPL23AP1-201ENST00000428990 471 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.83□□□□□ -1.64
COPAP53621 ISCA1P2-201ENST00000438679 421 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC097262.1-201ENST00000452559 548 ntBASIC4.83□□□□□ -1.64
COPAP53621 RPS27AP8-201ENST00000452665 445 ntBASIC4.83□□□□□ -1.64
COPAP53621 NCOR1P1-202ENST00000486162 291 ntBASIC4.83□□□□□ -1.64
COPAP53621 RPL7P38-201ENST00000488396 739 ntBASIC4.83□□□□□ -1.64
COPAP53621 RN7SL558P-201ENST00000497468 299 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 ATP1B1P1-201ENST00000509767 915 ntBASIC4.83□□□□□ -1.64
COPAP53621 HMGB3P13-201ENST00000511263 607 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC117532.1-201ENST00000514638 323 ntBASIC4.83□□□□□ -1.64
COPAP53621 RNY4P37-201ENST00000516225 96 ntBASIC4.83□□□□□ -1.64
COPAP53621 RNU6-678P-201ENST00000516832 109 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.83□□□□□ -1.64
COPAP53621 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.83□□□□□ -1.64
COPAP53621 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.83□□□□□ -1.64
COPAP53621 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 MIR4715-201ENST00000584117 79 ntBASIC4.83□□□□□ -1.64
COPAP53621 SNORD39.3-201ENST00000584451 71 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC073091.2-201ENST00000603205 907 ntBASIC4.83□□□□□ -1.64
COPAP53621 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC112220.3-201ENST00000605502 502 ntBASIC4.83□□□□□ -1.64
COPAP53621 AL359535.1-201ENST00000612100 1087 ntBASIC4.83□□□□□ -1.64
COPAP53621 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 AC004223.4-201ENST00000612426 332 ntBASIC4.83□□□□□ -1.64
COPAP53621 MIR6758-201ENST00000620653 63 ntBASIC4.83□□□□□ -1.64
COPAP53621 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COPAP53621 TLK1P1-201ENST00000456760 2440 ntBASIC4.83□□□□□ -1.64
COPAP53621 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.83□□□□□ -1.64
COPAP53621 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 AL390862.1-201ENST00000635467 1469 ntBASIC4.82□□□□□ -1.64
COPAP53621 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 AC009643.2-201ENST00000603543 1448 ntBASIC4.82□□□□□ -1.64
COPAP53621 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
COPAP53621 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.82□□□□□ -1.64
COPAP53621 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 AL391994.1-201ENST00000254724 282 ntBASIC4.82□□□□□ -1.64
COPAP53621 RNU6-216P-201ENST00000363282 104 ntBASIC4.82□□□□□ -1.64
COPAP53621 AL021407.1-201ENST00000404531 386 ntBASIC4.82□□□□□ -1.64
COPAP53621 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 ATG4AP1-201ENST00000416893 538 ntBASIC4.82□□□□□ -1.64
COPAP53621 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.82□□□□□ -1.64
COPAP53621 CENPIP1-201ENST00000425713 902 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC234779.1-201ENST00000425910 285 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC092017.2-201ENST00000427600 362 ntBASIC4.82□□□□□ -1.64
COPAP53621 VDAC1P6-201ENST00000430062 855 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC092162.1-201ENST00000432828 434 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 RPS17P8-201ENST00000434525 335 ntBASIC4.82□□□□□ -1.64
COPAP53621 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 ELOCP8-201ENST00000439309 332 ntBASIC4.82□□□□□ -1.64
COPAP53621 ELOCP15-201ENST00000442090 332 ntBASIC4.82□□□□□ -1.64
COPAP53621 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 AC009961.3-201ENST00000449832 765 ntBASIC4.82□□□□□ -1.64
COPAP53621 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 AC022795.1-201ENST00000473808 480 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC010301.1-201ENST00000473936 355 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.82□□□□□ -1.64
COPAP53621 RPL30P6-201ENST00000475925 342 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.82□□□□□ -1.64
COPAP53621 AC104685.1-201ENST00000502445 371 ntBASIC4.82□□□□□ -1.64
COPAP53621 KLRA1P-201ENST00000503499 986 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 AC090502.2-201ENST00000549267 280 ntBASIC4.82□□□□□ -1.64
COPAP53621 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 AC105129.1-201ENST00000560250 297 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.82□□□□□ -1.64
COPAP53621 MIR4504-201ENST00000577413 92 ntBASIC4.82□□□□□ -1.64
COPAP53621 MIR4284-201ENST00000578924 81 ntBASIC4.82□□□□□ -1.64
COPAP53621 SNORA74C-1-201ENST00000580726 201 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.82□□□□□ -1.64
COPAP53621 AC010680.4-201ENST00000605334 543 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms