Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC073114.1-201ENST00000612027 490 ntBASIC4.78□□□□□ -1.64
COPB1P53618 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COPB1P53618 AC131238.1-201ENST00000617135 328 ntBASIC4.78□□□□□ -1.64
COPB1P53618 uc_338.9-201ENST00000617424 182 ntBASIC4.78□□□□□ -1.64
COPB1P53618 AC018926.3-201ENST00000618841 406 ntBASIC4.78□□□□□ -1.64
COPB1P53618 ATE1-AS1-202ENST00000636460 506 ntBASIC4.78□□□□□ -1.64
COPB1P53618 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COPB1P53618 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
COPB1P53618 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
COPB1P53618 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COPB1P53618 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.77□□□□□ -1.65
COPB1P53618 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.77□□□□□ -1.65
COPB1P53618 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 RNU6-839P-201ENST00000363347 108 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RNU1-130P-201ENST00000363930 160 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RHOT1P2-201ENST00000366423 333 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RNU6-317P-201ENST00000384031 107 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RNU6-225P-201ENST00000384613 103 ntBASIC4.77□□□□□ -1.65
COPB1P53618 Y_RNA.560-201ENST00000384689 102 ntBASIC4.77□□□□□ -1.65
COPB1P53618 MIR93-201ENST00000385024 80 ntBASIC4.77□□□□□ -1.65
COPB1P53618 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COPB1P53618 AL355379.1-201ENST00000405542 640 ntBASIC4.77□□□□□ -1.65
COPB1P53618 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 RNU2-6P-201ENST00000411404 190 ntBASIC4.77□□□□□ -1.65
COPB1P53618 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.77□□□□□ -1.65
COPB1P53618 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.77□□□□□ -1.65
COPB1P53618 RPS24P8-201ENST00000431490 402 ntBASIC4.77□□□□□ -1.65
COPB1P53618 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.77□□□□□ -1.65
COPB1P53618 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.77□□□□□ -1.65
COPB1P53618 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 NPM1P39-201ENST00000449818 867 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RPL7P22-201ENST00000466005 733 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RPL35AP15-201ENST00000468042 339 ntBASIC4.77□□□□□ -1.65
COPB1P53618 AC015724.1-201ENST00000478577 156 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RPS27P23-201ENST00000487608 251 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RPS6P4-201ENST00000494693 758 ntBASIC4.77□□□□□ -1.65
COPB1P53618 AC092045.1-201ENST00000495716 1231 ntBASIC4.77□□□□□ -1.65
COPB1P53618 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 AC108145.1-201ENST00000503770 153 ntBASIC4.77□□□□□ -1.65
COPB1P53618 IGBP1P5-201ENST00000507524 1000 ntBASIC4.77□□□□□ -1.65
COPB1P53618 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.77□□□□□ -1.65
COPB1P53618 HMGB3P13-201ENST00000511263 607 ntBASIC4.77□□□□□ -1.65
COPB1P53618 MTND3P5-201ENST00000512798 333 ntBASIC4.77□□□□□ -1.65
COPB1P53618 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 NDUFA5P2-201ENST00000519723 344 ntBASIC4.77□□□□□ -1.65
COPB1P53618 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.77□□□□□ -1.65
COPB1P53618 AP000827.1-201ENST00000527814 258 ntBASIC4.77□□□□□ -1.65
COPB1P53618 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.77□□□□□ -1.65
COPB1P53618 MIR4675-201ENST00000577898 77 ntBASIC4.77□□□□□ -1.65
COPB1P53618 RN7SL690P-201ENST00000582087 240 ntBASIC4.77□□□□□ -1.65
COPB1P53618 WISP1-OT1-201ENST00000602893 642 ntBASIC4.77□□□□□ -1.65
COPB1P53618 MIR432-201ENST00000606207 94 ntBASIC4.77□□□□□ -1.65
COPB1P53618 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
COPB1P53618 AC007546.1-201ENST00000619452 559 ntBASIC4.77□□□□□ -1.65
COPB1P53618 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.77□□□□□ -1.65
COPB1P53618 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.77□□□□□ -1.65
COPB1P53618 AC107027.3-201ENST00000565095 3473 ntBASIC4.77□□□□□ -1.65
COPB1P53618 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPB1P53618 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.77□□□□□ -1.65
COPB1P53618 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COPB1P53618 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 Z99496.1-201ENST00000469424 1477 ntBASIC4.76□□□□□ -1.65
COPB1P53618 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COPB1P53618 SNORD113.2-201ENST00000364166 89 ntBASIC4.76□□□□□ -1.65
COPB1P53618 RNVU1-6-201ENST00000364688 164 ntBASIC4.76□□□□□ -1.65
COPB1P53618 MIR3065-201ENST00000390137 79 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AL161909.1-201ENST00000397390 712 ntBASIC4.76□□□□□ -1.65
COPB1P53618 Y_RNA.599-201ENST00000410489 109 ntBASIC4.76□□□□□ -1.65
COPB1P53618 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.76□□□□□ -1.65
COPB1P53618 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.76□□□□□ -1.65
COPB1P53618 NPM1P11-201ENST00000417106 855 ntBASIC4.76□□□□□ -1.65
COPB1P53618 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 RPL7AP25-201ENST00000423357 805 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 AL353706.1-201ENST00000436728 494 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.76□□□□□ -1.65
COPB1P53618 MTND1P34-201ENST00000438556 671 ntBASIC4.76□□□□□ -1.65
COPB1P53618 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 HMGB3P9-201ENST00000441799 583 ntBASIC4.76□□□□□ -1.65
COPB1P53618 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.76□□□□□ -1.65
COPB1P53618 AC073264.2-201ENST00000448886 166 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms