Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 AC019322.1-201ENST00000571869 389 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 SS18L2P2-201ENST00000583960 235 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC243960.4-201ENST00000600532 288 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC069307.1-201ENST00000602820 447 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC108738.1-201ENST00000603703 237 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.06□□□□□ -1.44
USP11P51784 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 AC010632.3-201ENST00000611377 369 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.06□□□□□ -1.44
USP11P51784 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
USP11P51784 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 OR11H4-201ENST00000315409 1082 ntBASIC6.05□□□□□ -1.44
USP11P51784 RNU1-19P-201ENST00000363306 165 ntBASIC6.05□□□□□ -1.44
USP11P51784 RNU6-777P-201ENST00000364265 104 ntBASIC6.05□□□□□ -1.44
USP11P51784 Y_RNA.381-201ENST00000365666 102 ntBASIC6.05□□□□□ -1.44
USP11P51784 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 BX510359.3-201ENST00000422168 306 ntBASIC6.05□□□□□ -1.44
USP11P51784 RPL7P57-201ENST00000423238 740 ntBASIC6.05□□□□□ -1.44
USP11P51784 AC108075.1-201ENST00000424692 529 ntBASIC6.05□□□□□ -1.44
USP11P51784 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 MTND3P2-201ENST00000438452 342 ntBASIC6.05□□□□□ -1.44
USP11P51784 RPL23AP16-201ENST00000441715 421 ntBASIC6.05□□□□□ -1.44
USP11P51784 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 MTCO1P27-201ENST00000448269 226 ntBASIC6.05□□□□□ -1.44
USP11P51784 TRGVB-201ENST00000453257 471 ntBASIC6.05□□□□□ -1.44
USP11P51784 MTCO1P42-201ENST00000457379 726 ntBASIC6.05□□□□□ -1.44
USP11P51784 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.05□□□□□ -1.44
USP11P51784 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 RPS4XP1-201ENST00000482189 787 ntBASIC6.05□□□□□ -1.44
USP11P51784 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 AC112204.1-201ENST00000502591 103 ntBASIC6.05□□□□□ -1.44
USP11P51784 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 AC093809.1-201ENST00000509155 340 ntBASIC6.05□□□□□ -1.44
USP11P51784 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 HMGN1P9-201ENST00000515212 298 ntBASIC6.05□□□□□ -1.44
USP11P51784 Y_RNA.672-201ENST00000516289 104 ntBASIC6.05□□□□□ -1.44
USP11P51784 FTH1P11-201ENST00000517577 551 ntBASIC6.05□□□□□ -1.44
USP11P51784 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 AC068587.4-201ENST00000533893 186 ntBASIC6.05□□□□□ -1.44
USP11P51784 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.05□□□□□ -1.44
USP11P51784 POLR2KP1-201ENST00000553226 168 ntBASIC6.05□□□□□ -1.44
USP11P51784 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 AC051619.2-201ENST00000559063 397 ntBASIC6.05□□□□□ -1.44
USP11P51784 AC122134.1-201ENST00000565664 1104 ntBASIC6.05□□□□□ -1.44
USP11P51784 MIR1269B-201ENST00000580405 75 ntBASIC6.05□□□□□ -1.44
USP11P51784 AP001180.3-201ENST00000582221 145 ntBASIC6.05□□□□□ -1.44
USP11P51784 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 CKS1BP3-201ENST00000600888 237 ntBASIC6.05□□□□□ -1.44
USP11P51784 AC007687.1-201ENST00000602704 304 ntBASIC6.05□□□□□ -1.44
USP11P51784 AC013244.1-201ENST00000604279 193 ntBASIC6.05□□□□□ -1.44
USP11P51784 AL162431.4-201ENST00000604674 411 ntBASIC6.05□□□□□ -1.44
USP11P51784 AL355802.3-201ENST00000607571 545 ntBASIC6.05□□□□□ -1.44
USP11P51784 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.05□□□□□ -1.44
USP11P51784 AL122125.1-201ENST00000616999 600 ntBASIC6.05□□□□□ -1.44
USP11P51784 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
USP11P51784 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 UGT2B26P-201ENST00000508672 1613 ntBASIC6.05□□□□□ -1.44
USP11P51784 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.05□□□□□ -1.44
USP11P51784 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
USP11P51784 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP11P51784 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 PABPC1P6-201ENST00000445594 1829 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC235565.1-201ENST00000456962 1325 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms