Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF144AP50876 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
RNF144AP50876 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RNF144AP50876 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF144AP50876 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF144AP50876 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF144AP50876 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF144AP50876 Y_RNA.14-201ENST00000362415 103 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 RNA5SP321-201ENST00000362722 111 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 SNORA70H-201ENST00000383910 135 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 SNORA70J-201ENST00000384182 135 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 SNORA24.1-201ENST00000384401 135 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 RNU1-46P-201ENST00000384425 164 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 MT-TW-201ENST00000387382 68 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF144AP50876 RPL21P1-201ENST00000399532 476 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AL136372.1-201ENST00000403060 228 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 MIR1252-201ENST00000408861 65 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 RNU2-38P-201ENST00000410856 79 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF144AP50876 PPIAP13-201ENST00000434706 478 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF144AP50876 HIGD1AP11-201ENST00000438361 280 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 GAPDHP33-201ENST00000443168 1013 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC112492.4-201ENST00000456549 352 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF144AP50876 AP001992.1-205ENST00000462248 379 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 RPL7P51-201ENST00000490532 749 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF144AP50876 AC009901.1-201ENST00000506703 541 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AL390198.2-201ENST00000510553 222 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC025465.3-201ENST00000510570 311 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 MTND1P19-201ENST00000511780 315 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF144AP50876 TBCAP3-201ENST00000512475 312 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 RNU6-138P-201ENST00000515952 107 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF144AP50876 TRIM77BP-201ENST00000524985 1119 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AP003385.6-201ENST00000531603 374 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AP001858.2-201ENST00000536213 601 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF144AP50876 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.06□□□□□ -1.44
RNF144AP50876 AC106782.4-201ENST00000568264 210 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC024619.4-201ENST00000580924 316 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC006254.3-201ENST00000603353 884 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 Z98751.3-201ENST00000604447 521 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AL512329.2-201ENST00000607350 548 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF144AP50876 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF144AP50876 AL138713.1-201ENST00000624026 2130 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF144AP50876 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF144AP50876 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF144AP50876 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF144AP50876 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF144AP50876 AC079753.1-201ENST00000623243 3868 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RNF144AP50876 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF144AP50876 AC092724.1-201ENST00000624623 3397 ntBASIC6.06□□□□□ -1.44
RNF144AP50876 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RNF144AP50876 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF144AP50876 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF144AP50876 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RNF144AP50876 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF144AP50876 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF144AP50876 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF144AP50876 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RNF144AP50876 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF144AP50876 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF144AP50876 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF144AP50876 OR10R3P-201ENST00000361688 942 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 Y_RNA.2-201ENST00000362330 96 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 Y_RNA.222-201ENST00000364264 102 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 RNU6-200P-201ENST00000364743 107 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 RNU6-61P-201ENST00000365528 109 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 Y_RNA.555-201ENST00000384673 110 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RNF144AP50876 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF144AP50876 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF144AP50876 AL137014.1-201ENST00000420490 1226 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 RPL7AP14-201ENST00000424041 802 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 AL590632.1-201ENST00000424289 371 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 RPS17P8-201ENST00000434525 335 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF144AP50876 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF144AP50876 UBBP5-201ENST00000446970 266 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.05□□□□□ -1.44
RNF144AP50876 AL590664.1-201ENST00000448065 339 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 AC022080.2-201ENST00000452932 533 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 PLGLA-201ENST00000465668 449 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 RN7SL790P-201ENST00000474043 298 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF144AP50876 AC021146.3-201ENST00000511911 260 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF144AP50876 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF144AP50876 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF144AP50876 HMGN1P26-201ENST00000558737 303 ntBASIC6.05□□□□□ -1.44
RNF144AP50876 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF144AP50876 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF144AP50876 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms