Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 USP9YP33-201ENST00000412220 421 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AC004987.3-201ENST00000413879 771 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AL732292.1-201ENST00000426692 226 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AL390023.1-201ENST00000428836 262 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPAP49450 USP9YP35-201ENST00000435696 412 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 AC112498.1-201ENST00000444401 332 ntBASIC4.26□□□□□ -1.73
CENPAP49450 Z80107.2-201ENST00000445127 392 ntBASIC4.26□□□□□ -1.73
CENPAP49450 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 MTND2P19-201ENST00000449129 1012 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AC073850.1-201ENST00000449243 255 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.26□□□□□ -1.73
CENPAP49450 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 MTCO3P16-201ENST00000454456 754 ntBASIC4.26□□□□□ -1.73
CENPAP49450 MTCO3P11-201ENST00000455103 774 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPAP49450 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 RPL23AP56-201ENST00000460778 453 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 MTND3P7-201ENST00000474435 343 ntBASIC4.26□□□□□ -1.73
CENPAP49450 RN7SL177P-201ENST00000476596 299 ntBASIC4.26□□□□□ -1.73
CENPAP49450 RPSAP50-201ENST00000481955 852 ntBASIC4.26□□□□□ -1.73
CENPAP49450 RPL7P38-201ENST00000488396 739 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AC008953.1-201ENST00000497334 318 ntBASIC4.26□□□□□ -1.73
CENPAP49450 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPAP49450 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 OR51K1P-201ENST00000510214 950 ntBASIC4.26□□□□□ -1.73
CENPAP49450 XKRY-201ENST00000510392 1100 ntBASIC4.26□□□□□ -1.73
CENPAP49450 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPAP49450 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 Vault.1-201ENST00000516474 102 ntBASIC4.26□□□□□ -1.73
CENPAP49450 RNA5SP34-201ENST00000516887 130 ntBASIC4.26□□□□□ -1.73
CENPAP49450 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.26□□□□□ -1.73
CENPAP49450 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.26□□□□□ -1.73
CENPAP49450 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.26□□□□□ -1.73
CENPAP49450 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPAP49450 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.26□□□□□ -1.73
CENPAP49450 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 AC004223.2-201ENST00000590309 544 ntBASIC4.26□□□□□ -1.73
CENPAP49450 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 AC010738.1-201ENST00000604970 987 ntBASIC4.26□□□□□ -1.73
CENPAP49450 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.26□□□□□ -1.73
CENPAP49450 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPAP49450 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CENPAP49450 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CENPAP49450 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPAP49450 OR4A15-201ENST00000314706 1035 ntBASIC4.25□□□□□ -1.73
CENPAP49450 RN7SKP115-201ENST00000363177 317 ntBASIC4.25□□□□□ -1.73
CENPAP49450 U8.4-201ENST00000363626 134 ntBASIC4.25□□□□□ -1.73
CENPAP49450 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CENPAP49450 RNU1-82P-201ENST00000390851 165 ntBASIC4.25□□□□□ -1.73
CENPAP49450 ATP5F1P4-201ENST00000397288 746 ntBASIC4.25□□□□□ -1.73
CENPAP49450 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CENPAP49450 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CENPAP49450 RN7SKP273-201ENST00000411392 314 ntBASIC4.25□□□□□ -1.73
CENPAP49450 CHEK2P3-201ENST00000416118 248 ntBASIC4.25□□□□□ -1.73
CENPAP49450 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPAP49450 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPAP49450 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPAP49450 MTND4P32-201ENST00000437189 1237 ntBASIC4.25□□□□□ -1.73
CENPAP49450 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPAP49450 CEACAMP9-201ENST00000442990 513 ntBASIC4.25□□□□□ -1.73
CENPAP49450 MTCO1P48-201ENST00000448024 1096 ntBASIC4.25□□□□□ -1.73
CENPAP49450 AC010733.1-201ENST00000451515 401 ntBASIC4.25□□□□□ -1.73
CENPAP49450 DDX39BP2-208ENST00000453923 258 ntBASIC4.25□□□□□ -1.73
CENPAP49450 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPAP49450 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPAP49450 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.25□□□□□ -1.73
CENPAP49450 AC005532.2-201ENST00000467154 373 ntBASIC4.25□□□□□ -1.73
CENPAP49450 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPAP49450 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
CENPAP49450 KLRA1P-201ENST00000503499 986 ntBASIC4.25□□□□□ -1.73
CENPAP49450 MTCYBP17-201ENST00000503579 789 ntBASIC4.25□□□□□ -1.73
CENPAP49450 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.25□□□□□ -1.73
CENPAP49450 HSPE1P23-201ENST00000509838 286 ntBASIC4.25□□□□□ -1.73
CENPAP49450 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.25□□□□□ -1.73
CENPAP49450 RNA5SP73-201ENST00000516744 108 ntBASIC4.25□□□□□ -1.73
CENPAP49450 RN7SKP82-201ENST00000516786 223 ntBASIC4.25□□□□□ -1.73
CENPAP49450 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.25□□□□□ -1.73
CENPAP49450 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.25□□□□□ -1.73
CENPAP49450 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.25□□□□□ -1.73
CENPAP49450 ATP5J2P6-201ENST00000565203 266 ntBASIC4.25□□□□□ -1.73
CENPAP49450 MIR4644-201ENST00000579929 84 ntBASIC4.25□□□□□ -1.73
CENPAP49450 AC110760.3-201ENST00000598794 467 ntBASIC4.25□□□□□ -1.73
CENPAP49450 AP000811.1-201ENST00000603803 651 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms