Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AF001550.2-201ENST00000636643 217 ntBASIC4.16□□□□□ -1.74
LHX1P48742 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
LHX1P48742 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
LHX1P48742 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX1P48742 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.15□□□□□ -1.74
LHX1P48742 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LHX1P48742 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LHX1P48742 AC012020.1-201ENST00000624541 1728 ntBASIC4.15□□□□□ -1.74
LHX1P48742 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.74
LHX1P48742 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.15□□□□□ -1.74
LHX1P48742 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LHX1P48742 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.15□□□□□ -1.75
LHX1P48742 RNU6-224P-201ENST00000384055 107 ntBASIC4.15□□□□□ -1.75
LHX1P48742 RPL32P23-201ENST00000397237 405 ntBASIC4.15□□□□□ -1.75
LHX1P48742 GSTA8P-201ENST00000404253 637 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.15□□□□□ -1.75
LHX1P48742 MTCO2P23-201ENST00000425216 680 ntBASIC4.15□□□□□ -1.75
LHX1P48742 C1DP1-201ENST00000426049 402 ntBASIC4.15□□□□□ -1.75
LHX1P48742 ELOCP8-201ENST00000439309 332 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 ELOCP15-201ENST00000442090 332 ntBASIC4.15□□□□□ -1.75
LHX1P48742 EXOSC3P1-201ENST00000448649 500 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.15□□□□□ -1.75
LHX1P48742 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 AC010469.1-201ENST00000463864 576 ntBASIC4.15□□□□□ -1.75
LHX1P48742 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.15□□□□□ -1.75
LHX1P48742 RPL31P61-201ENST00000496160 376 ntBASIC4.15□□□□□ -1.75
LHX1P48742 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 AC110792.2-201ENST00000510278 224 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LHX1P48742 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.15□□□□□ -1.75
LHX1P48742 DEFB130C-202ENST00000530001 230 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.15□□□□□ -1.75
LHX1P48742 AC044913.1-201ENST00000557200 430 ntBASIC4.15□□□□□ -1.75
LHX1P48742 MTCYBP23-201ENST00000558717 1102 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AC017100.2-201ENST00000584628 355 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AC128687.2-201ENST00000609657 566 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.15□□□□□ -1.75
LHX1P48742 PART1_2.1-201ENST00000612397 250 ntBASIC4.15□□□□□ -1.75
LHX1P48742 FP236240.3-201ENST00000623061 327 ntBASIC4.15□□□□□ -1.75
LHX1P48742 AC034229.5-201ENST00000624258 185 ntBASIC4.15□□□□□ -1.75
LHX1P48742 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.15□□□□□ -1.75
LHX1P48742 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LHX1P48742 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LHX1P48742 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LHX1P48742 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
LHX1P48742 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LHX1P48742 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LHX1P48742 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.15□□□□□ -1.75
LHX1P48742 SAGE2P-201ENST00000420011 2126 ntBASIC4.15□□□□□ -1.75
LHX1P48742 MTND4P8-201ENST00000514997 1362 ntBASIC4.14□□□□□ -1.75
LHX1P48742 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.14□□□□□ -1.75
LHX1P48742 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LHX1P48742 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LHX1P48742 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LHX1P48742 MIR30B-201ENST00000384850 88 ntBASIC4.14□□□□□ -1.75
LHX1P48742 MIR134-201ENST00000385258 73 ntBASIC4.14□□□□□ -1.75
LHX1P48742 MIR199A2-201ENST00000385289 110 ntBASIC4.14□□□□□ -1.75
LHX1P48742 MTCO1P56-201ENST00000401674 224 ntBASIC4.14□□□□□ -1.75
LHX1P48742 RNU6-584P-201ENST00000410350 95 ntBASIC4.14□□□□□ -1.75
LHX1P48742 RNU6-575P-201ENST00000411326 105 ntBASIC4.14□□□□□ -1.75
LHX1P48742 MTCO2P8-201ENST00000412213 658 ntBASIC4.14□□□□□ -1.75
LHX1P48742 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.14□□□□□ -1.75
LHX1P48742 ELOCP18-201ENST00000434209 337 ntBASIC4.14□□□□□ -1.75
LHX1P48742 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.14□□□□□ -1.75
LHX1P48742 KCTD9P3-201ENST00000434597 1169 ntBASIC4.14□□□□□ -1.75
LHX1P48742 RAB11AP1-201ENST00000442978 646 ntBASIC4.14□□□□□ -1.75
LHX1P48742 AL121877.1-201ENST00000453704 622 ntBASIC4.14□□□□□ -1.75
LHX1P48742 DUXAP8-207ENST00000456786 622 ntBASIC4.14□□□□□ -1.75
LHX1P48742 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.14□□□□□ -1.75
LHX1P48742 RPS20P21-201ENST00000466859 343 ntBASIC4.14□□□□□ -1.75
LHX1P48742 GTF2IP9-201ENST00000502460 301 ntBASIC4.14□□□□□ -1.75
LHX1P48742 VWA8P1-201ENST00000510889 176 ntBASIC4.14□□□□□ -1.75
LHX1P48742 RNU6-202P-201ENST00000515998 96 ntBASIC4.14□□□□□ -1.75
LHX1P48742 RNA5SP164-201ENST00000516533 110 ntBASIC4.14□□□□□ -1.75
LHX1P48742 AC023632.1-201ENST00000518463 375 ntBASIC4.14□□□□□ -1.75
LHX1P48742 MYL12AP1-201ENST00000518490 515 ntBASIC4.14□□□□□ -1.75
LHX1P48742 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.14□□□□□ -1.75
LHX1P48742 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.14□□□□□ -1.75
LHX1P48742 MTCO1P49-201ENST00000523429 802 ntBASIC4.14□□□□□ -1.75
LHX1P48742 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.14□□□□□ -1.75
LHX1P48742 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.14□□□□□ -1.75
LHX1P48742 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.14□□□□□ -1.75
LHX1P48742 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
LHX1P48742 AC006130.2-201ENST00000586202 326 ntBASIC4.14□□□□□ -1.75
LHX1P48742 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.14□□□□□ -1.75
LHX1P48742 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.14□□□□□ -1.75
LHX1P48742 AL390816.3-201ENST00000604527 1066 ntBASIC4.14□□□□□ -1.75
LHX1P48742 AC012603.1-201ENST00000606424 528 ntBASIC4.14□□□□□ -1.75
LHX1P48742 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.14□□□□□ -1.75
LHX1P48742 DUXAP10-204ENST00000612052 616 ntBASIC4.14□□□□□ -1.75
LHX1P48742 MIR6864-201ENST00000617935 70 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms