Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MIR30B-201ENST00000384850 88 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL15A1P39059 SNORA40.2-201ENST00000390847 128 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 ERHP2-201ENST00000402323 299 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 AL590290.1-201ENST00000405336 380 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 RNU6-77P-201ENST00000410554 91 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 AL450992.3-201ENST00000413192 568 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.14□□□□□ -1.59
COL15A1P39059 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.14□□□□□ -1.59
COL15A1P39059 AC027644.1-201ENST00000419595 298 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 NPM1P34-201ENST00000428821 893 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL15A1P39059 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.14□□□□□ -1.59
COL15A1P39059 RPL23AP89-201ENST00000439324 255 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 HMGB1P48-201ENST00000446155 598 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 Z99714.1-201ENST00000450463 807 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 ATG12P2-201ENST00000456830 416 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.14□□□□□ -1.59
COL15A1P39059 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.14□□□□□ -1.59
COL15A1P39059 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.14□□□□□ -1.59
COL15A1P39059 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.14□□□□□ -1.59
COL15A1P39059 RN7SL323P-201ENST00000494712 295 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 ARL4AP1-201ENST00000503220 705 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.14□□□□□ -1.59
COL15A1P39059 AP000926.4-201ENST00000527351 454 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.14□□□□□ -1.59
COL15A1P39059 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 AL354943.1-201ENST00000572103 781 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.14□□□□□ -1.59
COL15A1P39059 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.14□□□□□ -1.59
COL15A1P39059 MRPS35P3-201ENST00000603189 709 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 Z94722.1-201ENST00000604328 474 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL15A1P39059 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL15A1P39059 ZNF285B-201ENST00000561698 1767 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.14□□□□□ -1.59
COL15A1P39059 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL15A1P39059 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL15A1P39059 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL15A1P39059 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
COL15A1P39059 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL15A1P39059 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.13□□□□□ -1.59
COL15A1P39059 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL15A1P39059 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL15A1P39059 FAM133CP-201ENST00000332869 704 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL15A1P39059 AC009302.1-201ENST00000417147 390 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.13□□□□□ -1.59
COL15A1P39059 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.13□□□□□ -1.59
COL15A1P39059 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.13□□□□□ -1.59
COL15A1P39059 AL008629.1-201ENST00000438615 184 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 FGF7P5-201ENST00000441829 291 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 RPS20P21-201ENST00000466859 343 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.13□□□□□ -1.59
COL15A1P39059 FABP5P12-201ENST00000515543 389 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.13□□□□□ -1.59
COL15A1P39059 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.13□□□□□ -1.59
COL15A1P39059 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.13□□□□□ -1.59
COL15A1P39059 YPEL5P3-201ENST00000547227 352 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 DUXAP6-201ENST00000553858 601 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.13□□□□□ -1.59
COL15A1P39059 MTCYBP27-201ENST00000555160 670 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AADACP1-206ENST00000561502 1193 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.13□□□□□ -1.59
COL15A1P39059 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.13□□□□□ -1.59
COL15A1P39059 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.13□□□□□ -1.59
COL15A1P39059 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
COL15A1P39059 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 VN1R88P-201ENST00000596787 292 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 DPRXP5-201ENST00000604662 539 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AL133507.1-201ENST00000605269 557 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AL592148.2-201ENST00000612210 372 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 MIR7973-1-201ENST00000614683 76 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 uc_338.9-201ENST00000617424 182 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AC131159.1-201ENST00000621854 213 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 AC015726.3-201ENST00000624501 418 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.13□□□□□ -1.59
COL15A1P39059 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.13□□□□□ -1.59
COL15A1P39059 MIR1322-201ENST00000638013 71 ntBASIC5.13□□□□□ -1.59
COL15A1P39059 BX005019.1-201ENST00000561881 1810 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.12□□□□□ -1.59
COL15A1P39059 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 RNF6P1-201ENST00000444889 1784 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 MTND4P31-201ENST00000425607 1343 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL15A1P39059 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 snoZ40.1-201ENST00000364540 72 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.12□□□□□ -1.59
COL15A1P39059 SNORA5A-201ENST00000384111 134 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 SNORD116-8-201ENST00000384365 95 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms