Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
RPA3P35244 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.41□□□□□ -1.86
RPA3P35244 MIR218-2-201ENST00000385006 110 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.41□□□□□ -1.86
RPA3P35244 Z99755.1-201ENST00000414048 380 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.41□□□□□ -1.86
RPA3P35244 SYF2P2-201ENST00000417620 583 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.41□□□□□ -1.86
RPA3P35244 CYCSP4-201ENST00000429682 331 ntBASIC3.41□□□□□ -1.86
RPA3P35244 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RPA3P35244 AC008264.1-201ENST00000447612 367 ntBASIC3.41□□□□□ -1.86
RPA3P35244 SNRPGP5-201ENST00000456003 220 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AC091564.1-201ENST00000464563 479 ntBASIC3.41□□□□□ -1.86
RPA3P35244 OR5H3P-201ENST00000502817 919 ntBASIC3.41□□□□□ -1.86
RPA3P35244 IGKV2D-19-201ENST00000523346 262 ntBASIC3.41□□□□□ -1.86
RPA3P35244 OR4A2P-201ENST00000527276 913 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AC103843.2-201ENST00000530523 682 ntBASIC3.41□□□□□ -1.86
RPA3P35244 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.41□□□□□ -1.86
RPA3P35244 MIR3158-1-201ENST00000583596 81 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AC245389.1-201ENST00000605141 529 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.41□□□□□ -1.86
RPA3P35244 AC006133.1-201ENST00000617106 264 ntBASIC3.41□□□□□ -1.86
RPA3P35244 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RPA3P35244 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPA3P35244 DCAF13P1-201ENST00000495256 1330 ntBASIC3.41□□□□□ -1.86
RPA3P35244 AL365440.1-201ENST00000436135 2167 ntBASIC3.41□□□□□ -1.86
RPA3P35244 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPA3P35244 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPA3P35244 RNU6-564P-201ENST00000410983 104 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AC004022.2-201ENST00000413824 193 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AC004987.3-201ENST00000413879 771 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.4□□□□□ -1.87
RPA3P35244 AC092832.1-201ENST00000422934 400 ntBASIC3.4□□□□□ -1.87
RPA3P35244 ETF1P3-201ENST00000430422 1160 ntBASIC3.4□□□□□ -1.87
RPA3P35244 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AL035458.1-201ENST00000433096 585 ntBASIC3.4□□□□□ -1.87
RPA3P35244 MTCO1P52-201ENST00000433928 531 ntBASIC3.4□□□□□ -1.87
RPA3P35244 ARL4AP4-201ENST00000434170 518 ntBASIC3.4□□□□□ -1.87
RPA3P35244 B3GNT2P1-201ENST00000434960 952 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AC023512.1-201ENST00000444513 499 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.4□□□□□ -1.87
RPA3P35244 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.4□□□□□ -1.87
RPA3P35244 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.4□□□□□ -1.87
RPA3P35244 HMGB1P26-201ENST00000452520 628 ntBASIC3.4□□□□□ -1.87
RPA3P35244 SNORD108-201ENST00000459332 71 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AC012170.1-201ENST00000495139 359 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AP002812.1-201ENST00000495378 474 ntBASIC3.4□□□□□ -1.87
RPA3P35244 PCNAP1-201ENST00000505363 709 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AC108120.2-201ENST00000512973 294 ntBASIC3.4□□□□□ -1.87
RPA3P35244 FTH1P9-201ENST00000513251 355 ntBASIC3.4□□□□□ -1.87
RPA3P35244 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.4□□□□□ -1.87
RPA3P35244 RN7SKP13-201ENST00000515933 244 ntBASIC3.4□□□□□ -1.87
RPA3P35244 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.4□□□□□ -1.87
RPA3P35244 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.4□□□□□ -1.87
RPA3P35244 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.4□□□□□ -1.87
RPA3P35244 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.4□□□□□ -1.87
RPA3P35244 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.4□□□□□ -1.87
RPA3P35244 VN1R79P-201ENST00000593540 513 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AP004372.1-201ENST00000604842 844 ntBASIC3.4□□□□□ -1.87
RPA3P35244 AP003117.2-201ENST00000606010 545 ntBASIC3.4□□□□□ -1.87
RPA3P35244 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.4□□□□□ -1.87
RPA3P35244 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RPA3P35244 AL122126.1-201ENST00000546905 1318 ntBASIC3.4□□□□□ -1.87
RPA3P35244 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPA3P35244 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPA3P35244 RNU6-185P-201ENST00000384421 107 ntBASIC3.39□□□□□ -1.87
RPA3P35244 ATP5F1P3-201ENST00000397213 657 ntBASIC3.39□□□□□ -1.87
RPA3P35244 CCNB2P1-201ENST00000399411 1150 ntBASIC3.39□□□□□ -1.87
RPA3P35244 RSL24D1P1-201ENST00000404972 493 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
RPA3P35244 AC006960.1-201ENST00000419980 153 ntBASIC3.39□□□□□ -1.87
RPA3P35244 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPA3P35244 AL031736.2-201ENST00000426573 787 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.39□□□□□ -1.87
RPA3P35244 AC091286.1-201ENST00000431233 461 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.39□□□□□ -1.87
RPA3P35244 USP9YP7-201ENST00000436723 430 ntBASIC3.39□□□□□ -1.87
RPA3P35244 FTH1P1-201ENST00000437933 532 ntBASIC3.39□□□□□ -1.87
RPA3P35244 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPA3P35244 AC239367.2-201ENST00000447309 705 ntBASIC3.39□□□□□ -1.87
RPA3P35244 PPIAP3-201ENST00000450588 505 ntBASIC3.39□□□□□ -1.87
RPA3P35244 USP9YP32-201ENST00000452432 430 ntBASIC3.39□□□□□ -1.87
RPA3P35244 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 AP000893.1-201ENST00000474462 794 ntBASIC3.39□□□□□ -1.87
RPA3P35244 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.39□□□□□ -1.87
RPA3P35244 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 RNU1-143P-201ENST00000516296 146 ntBASIC3.39□□□□□ -1.87
RPA3P35244 SNORA67.7-201ENST00000516664 135 ntBASIC3.39□□□□□ -1.87
RPA3P35244 SCARNA20.6-201ENST00000517251 106 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 AC023158.1-201ENST00000561632 1025 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.39□□□□□ -1.87
RPA3P35244 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 SNORA51-201ENST00000606420 132 ntBASIC3.39□□□□□ -1.87
RPA3P35244 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
RPA3P35244 U1.23-201ENST00000610293 146 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms