Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM4SF1P30408 XPOTP1-201ENST00000443317 2398 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.73□□□□□ -1.65
TM4SF1P30408 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TM4SF1P30408 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
TM4SF1P30408 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AC026523.2-201ENST00000625039 7739 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.73□□□□□ -1.65
TM4SF1P30408 RNU6-353P-201ENST00000364266 108 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.73□□□□□ -1.65
TM4SF1P30408 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.73□□□□□ -1.65
TM4SF1P30408 RBMY2UP-201ENST00000453474 324 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 snoU109.3-201ENST00000459477 145 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.73□□□□□ -1.65
TM4SF1P30408 RNU6-1028P-201ENST00000517164 93 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 IGKV2-38-201ENST00000517443 247 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.73□□□□□ -1.65
TM4SF1P30408 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.73□□□□□ -1.65
TM4SF1P30408 AC026979.4-201ENST00000606555 645 ntBASIC4.73□□□□□ -1.65
TM4SF1P30408 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.73□□□□□ -1.65
TM4SF1P30408 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TM4SF1P30408 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM4SF1P30408 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.72□□□□□ -1.65
TM4SF1P30408 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
TM4SF1P30408 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.72□□□□□ -1.65
TM4SF1P30408 RNU1-87P-201ENST00000363727 170 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF1P30408 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF1P30408 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF1P30408 Y_RNA.578-201ENST00000390903 88 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 RNA5SP120-201ENST00000410900 112 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC013410.2-201ENST00000422627 201 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AL138785.1-201ENST00000425821 331 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 HMGB1P45-201ENST00000435986 653 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC105402.2-201ENST00000438503 358 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF1P30408 SETD6P1-201ENST00000444575 317 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF1P30408 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.72□□□□□ -1.65
TM4SF1P30408 RPL6P9-201ENST00000466502 859 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 RN7SL601P-201ENST00000471221 293 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC104982.1-201ENST00000478775 574 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF1P30408 RPL32P34-201ENST00000486380 400 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC108941.1-201ENST00000502853 530 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC091860.1-201ENST00000505723 432 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF1P30408 RNU6-276P-201ENST00000516114 96 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF1P30408 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF1P30408 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF1P30408 GTF2IP8-201ENST00000560687 584 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AP003485.1-201ENST00000625093 753 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AL773545.4-201ENST00000637262 310 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AL513478.4-201ENST00000641636 310 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 AC025263.3-201ENST00000622965 1396 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 AL365440.1-201ENST00000436135 2167 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF1P30408 AC093591.2-201ENST00000565254 3843 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TM4SF1P30408 AP001642.1-201ENST00000624727 2117 ntBASIC4.72□□□□□ -1.65
TM4SF1P30408 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF1P30408 ZNF833P-201ENST00000424938 1494 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 AL592437.2-201ENST00000421655 2434 ntBASIC4.71□□□□□ -1.66
TM4SF1P30408 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TM4SF1P30408 SNORD9-201ENST00000362566 104 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms