Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP1P23763 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP1P23763 RNU6-190P-201ENST00000384154 102 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RNU6-1009P-201ENST00000390996 107 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AL136116.1-201ENST00000403591 381 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 FTH1P26-201ENST00000406512 701 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP1P23763 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.33□□□□□ -1.56
VAMP1P23763 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP1P23763 PDSS1P1-201ENST00000422953 1114 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.33□□□□□ -1.56
VAMP1P23763 AC092651.1-201ENST00000426110 312 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RPL21P66-201ENST00000426566 466 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AC068287.1-201ENST00000430283 295 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 USP9YP7-201ENST00000436723 430 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 MTND4P25-201ENST00000441039 533 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RPL5P7-201ENST00000444235 813 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 USP9YP32-201ENST00000452432 430 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 snoU13.24-201ENST00000458998 104 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RNU6-953P-201ENST00000459154 107 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RPL7L1P8-201ENST00000469911 741 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RPS29P25-201ENST00000481709 171 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RN7SL608P-201ENST00000492377 279 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP1P23763 AC106872.2-201ENST00000494303 480 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RN7SL182P-201ENST00000496499 300 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RPL38P4-201ENST00000502376 214 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.33□□□□□ -1.56
VAMP1P23763 AC097460.2-201ENST00000511857 741 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 MINOS1P4-201ENST00000515470 318 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RN7SKP276-201ENST00000516242 268 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 RNU6-677P-201ENST00000516914 101 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP1P23763 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.33□□□□□ -1.56
VAMP1P23763 AC021006.3-201ENST00000530771 192 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP1P23763 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP1P23763 OR7E1P-201ENST00000533891 958 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 ADI1P3-201ENST00000549509 470 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.33□□□□□ -1.56
VAMP1P23763 FKBP1BP1-201ENST00000553366 325 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP1P23763 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.33□□□□□ -1.56
VAMP1P23763 BOLA2P1-201ENST00000584794 232 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AL670379.4-201ENST00000605279 254 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 LARP7P1-201ENST00000605576 316 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 PART1_3.1-201ENST00000619680 131 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AC006504.8-201ENST00000621046 635 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 AL360181.4-201ENST00000621752 134 ntBASIC5.33□□□□□ -1.56
VAMP1P23763 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.33□□□□□ -1.56
VAMP1P23763 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP1P23763 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VAMP1P23763 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
VAMP1P23763 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.33□□□□□ -1.56
VAMP1P23763 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP1P23763 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP1P23763 AC131971.1-201ENST00000332881 1482 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 AC009812.4-201ENST00000569134 1805 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
VAMP1P23763 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP1P23763 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 AL137003.2-201ENST00000606924 2538 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP1P23763 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.32□□□□□ -1.56
VAMP1P23763 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 CBX3P1-201ENST00000325243 554 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VAMP1P23763 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 SNORA7.2-201ENST00000364446 145 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 RNU4-66P-201ENST00000365199 138 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP1P23763 RNA5SP177-201ENST00000410122 107 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP1P23763 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.32□□□□□ -1.56
VAMP1P23763 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP1P23763 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP1P23763 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.32□□□□□ -1.56
VAMP1P23763 AL732292.1-201ENST00000426692 226 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 AL161722.2-201ENST00000434731 981 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 AC007790.1-201ENST00000439081 782 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 PCNPP2-201ENST00000441651 455 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 SNRPBP1-201ENST00000443634 282 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP1P23763 AL162395.1-201ENST00000457882 422 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP1P23763 RPS27AP17-201ENST00000463344 455 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 AC008620.1-201ENST00000468453 592 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 AL049874.1-201ENST00000489560 388 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 EIF3KP1-201ENST00000513279 656 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 RNU6-352P-201ENST00000516908 107 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP1P23763 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.32□□□□□ -1.56
VAMP1P23763 SSU72P6-201ENST00000532644 488 ntBASIC5.32□□□□□ -1.56
VAMP1P23763 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VAMP1P23763 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms