Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC092447.10-201ENST00000620607 1652 ntBASIC6.26□□□□□ -1.41
ERCC3P19447 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC3P19447 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC3P19447 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC3P19447 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC3P19447 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC3P19447 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC3P19447 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC3P19447 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
ERCC3P19447 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC3P19447 MT-TC-201ENST00000387405 66 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 SNORD115-47-201ENST00000391226 86 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 U3.36-201ENST00000408418 213 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC127391.1-201ENST00000411737 98 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AL589872.1-201ENST00000426602 288 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 OR2B7P-201ENST00000429302 934 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC3P19447 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC3P19447 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC3P19447 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC3P19447 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC3P19447 Z99127.3-201ENST00000448158 395 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC027673.1-201ENST00000456245 405 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC011005.3-201ENST00000491624 395 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC3P19447 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC3P19447 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC3P19447 OR5D15P-201ENST00000531671 942 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 AC137627.1-201ENST00000545761 289 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC3P19447 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC3P19447 AL390726.5-202ENST00000564800 256 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.25□□□□□ -1.41
ERCC3P19447 MTCO3P24-201ENST00000572729 782 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 NRBF2P1-201ENST00000587407 859 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC011468.4-201ENST00000603942 409 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC3P19447 AL049539.1-201ENST00000611964 459 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC091304.9-201ENST00000612091 226 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AL133173.2-201ENST00000614270 90 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC3P19447 AL732618.1-201ENST00000623251 301 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AP002799.1-201ENST00000623552 423 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 AC124864.2-201ENST00000624736 186 ntBASIC6.25□□□□□ -1.41
ERCC3P19447 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC3P19447 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
ERCC3P19447 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC3P19447 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC3P19447 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC3P19447 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC3P19447 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC104118.1-201ENST00000607625 1589 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC3P19447 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
ERCC3P19447 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC3P19447 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC3P19447 MIR181A1-201ENST00000385026 110 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
ERCC3P19447 AL109941.1-201ENST00000401925 229 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AL049693.1-201ENST00000402760 611 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 RPSAP35-201ENST00000413753 818 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC009961.2-201ENST00000435771 251 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.24□□□□□ -1.41
ERCC3P19447 PSPHP1-201ENST00000450062 261 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 AP1S2P1-201ENST00000457344 379 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 RPS20P24-201ENST00000457473 361 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 RPL37P6-202ENST00000464216 403 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
ERCC3P19447 HMGB1P21-201ENST00000502313 581 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 RN7SKP66-201ENST00000516681 231 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 CDH12P4-201ENST00000517835 295 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 CDH12P3-201ENST00000517935 295 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 CDH12P1-201ENST00000518435 295 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 IGKV2D-36-201ENST00000518643 226 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 AP000907.2-201ENST00000530827 353 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC123904.2-201ENST00000548059 300 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms