Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL096803.3-201ENST00000609032 532 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TOP2AP11388 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TOP2AP11388 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
TOP2AP11388 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.25□□□□□ -1.57
TOP2AP11388 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.25□□□□□ -1.57
TOP2AP11388 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TOP2AP11388 AC022018.1-201ENST00000430685 241 ntBASIC5.25□□□□□ -1.57
TOP2AP11388 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.25□□□□□ -1.57
TOP2AP11388 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.25□□□□□ -1.57
TOP2AP11388 AC008481.1-201ENST00000463278 396 ntBASIC5.25□□□□□ -1.57
TOP2AP11388 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.25□□□□□ -1.57
TOP2AP11388 RFPL4AP3-201ENST00000515267 345 ntBASIC5.25□□□□□ -1.57
TOP2AP11388 COX6CP8-201ENST00000522620 226 ntBASIC5.25□□□□□ -1.57
TOP2AP11388 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.25□□□□□ -1.57
TOP2AP11388 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOP2AP11388 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.25□□□□□ -1.57
TOP2AP11388 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOP2AP11388 HSPA8P1-201ENST00000425843 1833 ntBASIC5.25□□□□□ -1.57
TOP2AP11388 AL445528.1-201ENST00000426330 420 ntBASIC5.24□□□□□ -1.57
TOP2AP11388 METTL15P1-201ENST00000481421 1045 ntBASIC5.24□□□□□ -1.57
TOP2AP11388 snoU109.6-201ENST00000516831 118 ntBASIC5.24□□□□□ -1.57
TOP2AP11388 OR2AS2P-201ENST00000606902 342 ntBASIC5.24□□□□□ -1.57
TOP2AP11388 AL359535.1-201ENST00000612100 1087 ntBASIC5.24□□□□□ -1.57
TOP2AP11388 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TOP2AP11388 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOP2AP11388 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TOP2AP11388 AC015813.6-201ENST00000624409 5808 ntBASIC5.24□□□□□ -1.57
TOP2AP11388 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOP2AP11388 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TOP2AP11388 DUTP6-201ENST00000425573 462 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 NPM1P13-201ENST00000452663 865 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 AL133477.1-201ENST00000457472 514 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.23□□□□□ -1.57
TOP2AP11388 SETP12-201ENST00000514068 805 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 RN7SKP272-201ENST00000516988 232 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP2AP11388 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP2AP11388 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 AC007336.1-201ENST00000576365 3828 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP2AP11388 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
TOP2AP11388 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TOP2AP11388 RPS24P12-201ENST00000402084 394 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 AL592148.1-201ENST00000413568 445 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOP2AP11388 PTP4A1P3-201ENST00000433661 420 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 BX679664.1-201ENST00000434429 253 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 RPL7P28-201ENST00000437739 740 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP2AP11388 SLC31A1P1-201ENST00000451221 567 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 RN7SL432P-201ENST00000484057 298 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 AC019080.5-201ENST00000624891 757 ntBASIC5.23□□□□□ -1.57
TOP2AP11388 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
TOP2AP11388 GABRG2-229ENST00000641017 3628 ntBASIC5.22□□□□□ -1.57
TOP2AP11388 MTND4P26-201ENST00000415971 1359 ntBASIC5.22□□□□□ -1.57
TOP2AP11388 RNU6-851P-201ENST00000384565 107 ntBASIC5.22□□□□□ -1.57
TOP2AP11388 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOP2AP11388 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.22□□□□□ -1.57
TOP2AP11388 NIPA2P5-201ENST00000452282 464 ntBASIC5.22□□□□□ -1.57
TOP2AP11388 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.22□□□□□ -1.57
TOP2AP11388 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TOP2AP11388 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TOP2AP11388 RPS4XP5-202ENST00000449995 1334 ntBASIC5.21□□□□□ -1.57
TOP2AP11388 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.21□□□□□ -1.57
TOP2AP11388 ASNSP1-201ENST00000518311 1939 ntBASIC5.21□□□□□ -1.58
TOP2AP11388 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TOP2AP11388 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TOP2AP11388 MIR34A-201ENST00000385130 110 ntBASIC5.21□□□□□ -1.58
TOP2AP11388 RPS3P1-201ENST00000456781 192 ntBASIC5.21□□□□□ -1.58
TOP2AP11388 AC126389.1-201ENST00000477436 290 ntBASIC5.21□□□□□ -1.58
TOP2AP11388 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP2AP11388 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TOP2AP11388 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2AP11388 AL592494.2-201ENST00000425455 1548 ntBASIC5.2□□□□□ -1.58
TOP2AP11388 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2AP11388 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
TOP2AP11388 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.2□□□□□ -1.58
TOP2AP11388 AC011602.1-201ENST00000546484 331 ntBASIC5.2□□□□□ -1.58
TOP2AP11388 AL049844.2-201ENST00000604280 628 ntBASIC5.2□□□□□ -1.58
TOP2AP11388 AC004832.5-201ENST00000608677 401 ntBASIC5.2□□□□□ -1.58
TOP2AP11388 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2AP11388 AC233263.6-201ENST00000631132 1963 ntBASIC5.2□□□□□ -1.58
TOP2AP11388 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2AP11388 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2AP11388 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2AP11388 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TOP2AP11388 RNU6-859P-201ENST00000362728 107 ntBASIC5.19□□□□□ -1.58
TOP2AP11388 NPM1P24-201ENST00000428039 894 ntBASIC5.19□□□□□ -1.58
TOP2AP11388 AC010401.1-201ENST00000463867 348 ntBASIC5.19□□□□□ -1.58
TOP2AP11388 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.19□□□□□ -1.58
TOP2AP11388 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.19□□□□□ -1.58
TOP2AP11388 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TOP2AP11388 AC007566.2-201ENST00000603642 413 ntBASIC5.19□□□□□ -1.58
TOP2AP11388 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TOP2AP11388 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.19□□□□□ -1.58
TOP2AP11388 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TOP2AP11388 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.19□□□□□ -1.58
TOP2AP11388 RPL6P21-201ENST00000418672 846 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms