Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.29□□□□□ -1.88
UBCP0CG48 IGHV3-29-201ENST00000604817 344 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AL009028.1-201ENST00000604895 802 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 KATNBL1P1-201ENST00000605192 748 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.29□□□□□ -1.88
UBCP0CG48 AP001033.2-201ENST00000609701 1003 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AC092628.2-201ENST00000622492 339 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AC092608.3-201ENST00000625017 386 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
UBCP0CG48 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
UBCP0CG48 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.28□□□□□ -1.88
UBCP0CG48 MTND5P11-201ENST00000511037 1812 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
UBCP0CG48 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBCP0CG48 RLIMP1-201ENST00000339626 1680 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.28□□□□□ -1.88
UBCP0CG48 RPS26P8-201ENST00000393490 348 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 RPL21P65-201ENST00000406094 466 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AP000567.1-201ENST00000406413 156 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.28□□□□□ -1.88
UBCP0CG48 AL356095.1-201ENST00000417217 199 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 TCEA1P2-201ENST00000420496 906 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBCP0CG48 AL390879.2-203ENST00000426943 1121 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.28□□□□□ -1.88
UBCP0CG48 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.28□□□□□ -1.88
UBCP0CG48 MTCYBP31-201ENST00000438855 1122 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 SETD6P1-201ENST00000444575 317 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 CYCSP53-201ENST00000455540 265 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 NF1P3-201ENST00000457709 450 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 RPL5P24-201ENST00000463742 885 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 NPM1P17-201ENST00000479221 602 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.28□□□□□ -1.88
UBCP0CG48 HMGB3P15-201ENST00000507326 574 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.28□□□□□ -1.88
UBCP0CG48 PCBP2P3-201ENST00000509726 843 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.28□□□□□ -1.88
UBCP0CG48 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.28□□□□□ -1.88
UBCP0CG48 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.28□□□□□ -1.88
UBCP0CG48 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.28□□□□□ -1.88
UBCP0CG48 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.28□□□□□ -1.88
UBCP0CG48 AL121766.1-201ENST00000547436 487 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.28□□□□□ -1.88
UBCP0CG48 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.28□□□□□ -1.88
UBCP0CG48 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.28□□□□□ -1.88
UBCP0CG48 AC017100.2-201ENST00000584628 355 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AC008745.1-201ENST00000604064 271 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AC006023.2-201ENST00000609916 167 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AC005156.1-201ENST00000613371 573 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.28□□□□□ -1.88
UBCP0CG48 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.28□□□□□ -1.88
UBCP0CG48 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.28□□□□□ -1.88
UBCP0CG48 MIR492-201ENST00000638676 116 ntBASIC3.28□□□□□ -1.88
UBCP0CG48 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
UBCP0CG48 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
UBCP0CG48 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBCP0CG48 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.27□□□□□ -1.89
UBCP0CG48 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
UBCP0CG48 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBCP0CG48 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
UBCP0CG48 AL359893.1-201ENST00000447628 1580 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 RNU6-1339P-201ENST00000363574 91 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 SNORA62-201ENST00000365493 153 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AC073264.1-201ENST00000411508 416 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 HMGB3P20-201ENST00000417997 600 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AC073310.1-201ENST00000423226 1033 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.27□□□□□ -1.89
UBCP0CG48 AC006989.1-201ENST00000427212 131 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 SNORA71B-202ENST00000439232 272 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AL662791.1-201ENST00000441992 928 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 CEACAMP9-201ENST00000442990 513 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.27□□□□□ -1.89
UBCP0CG48 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBCP0CG48 SYPL1P1-201ENST00000473622 768 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AC087879.1-201ENST00000474343 374 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.27□□□□□ -1.89
UBCP0CG48 RPL23AP73-201ENST00000492507 471 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.27□□□□□ -1.89
UBCP0CG48 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBCP0CG48 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.27□□□□□ -1.89
UBCP0CG48 SNORA48.9-201ENST00000516419 162 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 CDH12P4-201ENST00000517835 295 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 CDH12P3-201ENST00000517935 295 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 CDH12P1-201ENST00000518435 295 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AF279873.1-201ENST00000523393 313 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.27□□□□□ -1.89
UBCP0CG48 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.27□□□□□ -1.89
UBCP0CG48 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.27□□□□□ -1.89
UBCP0CG48 EIF5A2P1-201ENST00000564027 460 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 AC120057.2-201ENST00000571520 271 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 MIR4738-201ENST00000579134 87 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 MIR3939-201ENST00000582614 106 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 KPNA2P3-201ENST00000584190 848 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 OR4G1P-201ENST00000588632 938 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.27□□□□□ -1.89
UBCP0CG48 AC011468.4-201ENST00000603942 409 ntBASIC3.27□□□□□ -1.89
UBCP0CG48 SNORA62.6-201ENST00000606322 83 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms