Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CDH12P3-201ENST00000517935 295 ntBASIC3.82□□□□□ -1.8
TPM1P09493 CDH12P1-201ENST00000518435 295 ntBASIC3.82□□□□□ -1.8
TPM1P09493 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.82□□□□□ -1.8
TPM1P09493 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM1P09493 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM1P09493 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 RNU1-30P-201ENST00000606575 163 ntBASIC3.82□□□□□ -1.8
TPM1P09493 AP004607.9-201ENST00000618202 316 ntBASIC3.82□□□□□ -1.8
TPM1P09493 FAM157B-203ENST00000639350 358 ntBASIC3.82□□□□□ -1.8
TPM1P09493 FAM91A3P-201ENST00000456826 2544 ntBASIC3.82□□□□□ -1.8
TPM1P09493 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.82□□□□□ -1.8
TPM1P09493 AC017071.1-201ENST00000564407 2204 ntBASIC3.82□□□□□ -1.8
TPM1P09493 AC090337.1-201ENST00000579651 2074 ntBASIC3.82□□□□□ -1.8
TPM1P09493 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TPM1P09493 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM1P09493 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TPM1P09493 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM1P09493 AC026951.1-201ENST00000559530 2459 ntBASIC3.81□□□□□ -1.8
TPM1P09493 GTF2H2B-203ENST00000508065 1432 ntBASIC3.81□□□□□ -1.8
TPM1P09493 AC021755.1-201ENST00000559747 1447 ntBASIC3.81□□□□□ -1.8
TPM1P09493 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TPM1P09493 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TPM1P09493 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TPM1P09493 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TPM1P09493 MIR148B-201ENST00000362252 99 ntBASIC3.81□□□□□ -1.8
TPM1P09493 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TPM1P09493 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TPM1P09493 MIR585-201ENST00000384887 94 ntBASIC3.81□□□□□ -1.8
TPM1P09493 RPL32P23-201ENST00000397237 405 ntBASIC3.81□□□□□ -1.8
TPM1P09493 RN7SKP53-201ENST00000411337 315 ntBASIC3.81□□□□□ -1.8
TPM1P09493 EI24P1-201ENST00000416584 867 ntBASIC3.81□□□□□ -1.8
TPM1P09493 NUP35P2-201ENST00000416748 943 ntBASIC3.81□□□□□ -1.8
TPM1P09493 YY1P1-201ENST00000427625 668 ntBASIC3.81□□□□□ -1.8
TPM1P09493 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM1P09493 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM1P09493 NCOR1P1-202ENST00000486162 291 ntBASIC3.81□□□□□ -1.8
TPM1P09493 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
TPM1P09493 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.81□□□□□ -1.8
TPM1P09493 AC108064.1-201ENST00000513791 460 ntBASIC3.81□□□□□ -1.8
TPM1P09493 RN7SKP141-201ENST00000516167 338 ntBASIC3.81□□□□□ -1.8
TPM1P09493 MIR2276-201ENST00000516886 89 ntBASIC3.81□□□□□ -1.8
TPM1P09493 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM1P09493 RANP9-201ENST00000519957 271 ntBASIC3.81□□□□□ -1.8
TPM1P09493 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM1P09493 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.81□□□□□ -1.8
TPM1P09493 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TPM1P09493 AL357559.1-201ENST00000622228 274 ntBASIC3.81□□□□□ -1.8
TPM1P09493 AC092184.1-201ENST00000625042 715 ntBASIC3.81□□□□□ -1.8
TPM1P09493 MIR6830-201ENST00000636015 70 ntBASIC3.81□□□□□ -1.8
TPM1P09493 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM1P09493 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM1P09493 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM1P09493 MTCO1P24-201ENST00000515438 1558 ntBASIC3.8□□□□□ -1.8
TPM1P09493 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM1P09493 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM1P09493 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TPM1P09493 OR4A15-201ENST00000314706 1035 ntBASIC3.8□□□□□ -1.8
TPM1P09493 SNORD56.3-201ENST00000363507 71 ntBASIC3.8□□□□□ -1.8
TPM1P09493 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM1P09493 RNU1-13P-201ENST00000384499 162 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM1P09493 RPL31P2-201ENST00000413849 377 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM1P09493 RPS15AP40-201ENST00000419621 391 ntBASIC3.8□□□□□ -1.8
TPM1P09493 OR4F13P-201ENST00000428478 931 ntBASIC3.8□□□□□ -1.8
TPM1P09493 MTCO1P43-201ENST00000431831 488 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AC006994.1-201ENST00000438212 839 ntBASIC3.8□□□□□ -1.8
TPM1P09493 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.8□□□□□ -1.8
TPM1P09493 ISCA1P2-201ENST00000438679 421 ntBASIC3.8□□□□□ -1.8
TPM1P09493 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.8□□□□□ -1.8
TPM1P09493 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM1P09493 AC008264.1-201ENST00000447612 367 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AC097262.1-201ENST00000452559 548 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM1P09493 RN7SL132P-201ENST00000478131 296 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AC107398.1-201ENST00000486904 505 ntBASIC3.8□□□□□ -1.8
TPM1P09493 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM1P09493 AC147055.1-201ENST00000509261 750 ntBASIC3.8□□□□□ -1.8
TPM1P09493 MIR2116-201ENST00000517221 80 ntBASIC3.8□□□□□ -1.8
TPM1P09493 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM1P09493 MTND2P26-201ENST00000528255 1029 ntBASIC3.8□□□□□ -1.8
TPM1P09493 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM1P09493 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM1P09493 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM1P09493 HMGN2P28-201ENST00000606102 262 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AC006338.2-201ENST00000616864 791 ntBASIC3.8□□□□□ -1.8
TPM1P09493 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM1P09493 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM1P09493 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM1P09493 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM1P09493 AC073476.4-201ENST00000628409 72 ntBASIC3.8□□□□□ -1.8
TPM1P09493 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
TPM1P09493 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TPM1P09493 AL079305.1-201ENST00000623159 3008 ntBASIC3.8□□□□□ -1.8
TPM1P09493 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TPM1P09493 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM1P09493 SNORA7.2-201ENST00000364446 145 ntBASIC3.79□□□□□ -1.8
TPM1P09493 SNORA48.8-201ENST00000391324 134 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms