Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 MTND1P23-201ENST00000416931 372 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 AL591419.1-201ENST00000427423 339 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 KCTD9P3-201ENST00000434597 1169 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 RPL23AP83-201ENST00000434984 473 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 AC104978.1-201ENST00000449387 391 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.09□□□□□ -1.59
COL3A1P02461 CYCSP20-201ENST00000473154 315 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL3A1P02461 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.09□□□□□ -1.59
COL3A1P02461 UBE2CP3-201ENST00000502715 450 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 AC026403.1-201ENST00000518938 295 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 RPL12P22-201ENST00000519073 490 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL3A1P02461 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.09□□□□□ -1.59
COL3A1P02461 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.09□□□□□ -1.59
COL3A1P02461 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.09□□□□□ -1.59
COL3A1P02461 AL139286.2-201ENST00000606838 396 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 AC068944.2-201ENST00000610373 403 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.09□□□□□ -1.59
COL3A1P02461 VN1R7P-201ENST00000619242 903 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.09□□□□□ -1.59
COL3A1P02461 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL3A1P02461 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL3A1P02461 AC068254.2-201ENST00000623938 3577 ntBASIC5.09□□□□□ -1.6
COL3A1P02461 ZNF962P-201ENST00000443465 3140 ntBASIC5.09□□□□□ -1.6
COL3A1P02461 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL3A1P02461 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
COL3A1P02461 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL3A1P02461 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL3A1P02461 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 RNU4-75P-201ENST00000364621 146 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 SNORA73.2-201ENST00000364946 201 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.08□□□□□ -1.6
COL3A1P02461 RPL7P60-201ENST00000397636 735 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.08□□□□□ -1.6
COL3A1P02461 AC007389.2-201ENST00000434630 306 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 ISCA1P2-201ENST00000438679 421 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 SNORA71B-202ENST00000439232 272 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 MRPL42P4-201ENST00000453267 443 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AC011037.1-201ENST00000483964 558 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AC021146.8-201ENST00000507455 733 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 RN7SKP34-201ENST00000516142 244 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.08□□□□□ -1.6
COL3A1P02461 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.08□□□□□ -1.6
COL3A1P02461 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.08□□□□□ -1.6
COL3A1P02461 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.08□□□□□ -1.6
COL3A1P02461 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.08□□□□□ -1.6
COL3A1P02461 VN1R88P-201ENST00000596787 292 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AL353621.2-201ENST00000605340 133 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AC131235.4-201ENST00000609288 620 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.08□□□□□ -1.6
COL3A1P02461 AC106871.1-201ENST00000568324 3102 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 AL390237.1-201ENST00000404226 1415 ntBASIC5.08□□□□□ -1.6
COL3A1P02461 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.08□□□□□ -1.6
COL3A1P02461 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.08□□□□□ -1.6
COL3A1P02461 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL3A1P02461 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
COL3A1P02461 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL3A1P02461 SNORD74.4-201ENST00000364129 80 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 SNORA5A-201ENST00000384111 134 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 Y_RNA.559-201ENST00000384686 107 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 RNU6-1242P-201ENST00000391052 103 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.07□□□□□ -1.6
COL3A1P02461 SYF2P2-201ENST00000417620 583 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.07□□□□□ -1.6
COL3A1P02461 AL591503.2-201ENST00000442314 1005 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 AL589880.1-201ENST00000448271 287 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 HMGB3P22-202ENST00000451823 572 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC093899.1-201ENST00000457984 376 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC080014.1-201ENST00000496877 1201 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AC139783.2-201ENST00000504847 1145 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AC093752.1-206ENST00000511823 336 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.07□□□□□ -1.6
COL3A1P02461 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC007115.1-201ENST00000546853 234 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms