Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 FTH1P21-201ENST00000512179 511 ntBASIC3.6□□□□□ -1.83
LSM1O15116 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM1O15116 AC093755.1-201ENST00000512950 1023 ntBASIC3.6□□□□□ -1.83
LSM1O15116 AC016065.2-201ENST00000514530 444 ntBASIC3.6□□□□□ -1.83
LSM1O15116 RPL12P22-201ENST00000519073 490 ntBASIC3.6□□□□□ -1.83
LSM1O15116 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM1O15116 AC022695.1-201ENST00000522089 237 ntBASIC3.6□□□□□ -1.83
LSM1O15116 CIR1P1-201ENST00000524055 1133 ntBASIC3.6□□□□□ -1.83
LSM1O15116 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM1O15116 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM1O15116 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM1O15116 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.6□□□□□ -1.83
LSM1O15116 AC006960.3-201ENST00000561845 705 ntBASIC3.6□□□□□ -1.83
LSM1O15116 CYP2C60P-201ENST00000566088 139 ntBASIC3.6□□□□□ -1.83
LSM1O15116 KLKP1-201ENST00000595979 403 ntBASIC3.6□□□□□ -1.83
LSM1O15116 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.6□□□□□ -1.83
LSM1O15116 AC107294.3-201ENST00000609211 526 ntBASIC3.6□□□□□ -1.83
LSM1O15116 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.6□□□□□ -1.83
LSM1O15116 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LSM1O15116 MIR4496-201ENST00000635896 61 ntBASIC3.6□□□□□ -1.83
LSM1O15116 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LSM1O15116 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
LSM1O15116 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.6□□□□□ -1.83
LSM1O15116 AL157700.1-201ENST00000561973 1432 ntBASIC3.6□□□□□ -1.83
LSM1O15116 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
LSM1O15116 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LSM1O15116 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LSM1O15116 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
LSM1O15116 RNU6-213P-201ENST00000384051 104 ntBASIC3.59□□□□□ -1.83
LSM1O15116 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LSM1O15116 RNA5SP424-201ENST00000390988 115 ntBASIC3.59□□□□□ -1.83
LSM1O15116 SOD2P1-201ENST00000396543 562 ntBASIC3.59□□□□□ -1.83
LSM1O15116 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 ZNF602P-201ENST00000405929 924 ntBASIC3.59□□□□□ -1.83
LSM1O15116 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LSM1O15116 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 ARL2BPP3-201ENST00000421226 480 ntBASIC3.59□□□□□ -1.83
LSM1O15116 AC002075.2-201ENST00000425207 252 ntBASIC3.59□□□□□ -1.83
LSM1O15116 TRIAP1P1-201ENST00000427062 225 ntBASIC3.59□□□□□ -1.83
LSM1O15116 CKS1BP5-201ENST00000434172 273 ntBASIC3.59□□□□□ -1.83
LSM1O15116 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.59□□□□□ -1.83
LSM1O15116 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.59□□□□□ -1.83
LSM1O15116 AC068135.1-201ENST00000446164 246 ntBASIC3.59□□□□□ -1.83
LSM1O15116 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.59□□□□□ -1.83
LSM1O15116 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.59□□□□□ -1.83
LSM1O15116 U3.44-201ENST00000458938 192 ntBASIC3.59□□□□□ -1.83
LSM1O15116 CABYRP1-201ENST00000465493 1045 ntBASIC3.59□□□□□ -1.83
LSM1O15116 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LSM1O15116 AC021146.5-201ENST00000503544 545 ntBASIC3.59□□□□□ -1.83
LSM1O15116 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.59□□□□□ -1.83
LSM1O15116 HIGD1AP3-201ENST00000515857 278 ntBASIC3.59□□□□□ -1.83
LSM1O15116 SCARNA14-201ENST00000516903 136 ntBASIC3.59□□□□□ -1.83
LSM1O15116 HMGB1P23-201ENST00000518743 568 ntBASIC3.59□□□□□ -1.83
LSM1O15116 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.59□□□□□ -1.83
LSM1O15116 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LSM1O15116 OR6C73P-201ENST00000546432 358 ntBASIC3.59□□□□□ -1.83
LSM1O15116 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
LSM1O15116 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.59□□□□□ -1.83
LSM1O15116 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM1O15116 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.59□□□□□ -1.83
LSM1O15116 AF230666.2-201ENST00000602328 725 ntBASIC3.59□□□□□ -1.83
LSM1O15116 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.59□□□□□ -1.83
LSM1O15116 AC006338.2-201ENST00000616864 791 ntBASIC3.59□□□□□ -1.83
LSM1O15116 AC083865.1-201ENST00000636634 831 ntBASIC3.59□□□□□ -1.83
LSM1O15116 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LSM1O15116 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LSM1O15116 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.59□□□□□ -1.83
LSM1O15116 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
LSM1O15116 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LSM1O15116 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LSM1O15116 MTND5P27-201ENST00000428871 1720 ntBASIC3.58□□□□□ -1.84
LSM1O15116 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
LSM1O15116 BTBD10P2-201ENST00000404779 676 ntBASIC3.58□□□□□ -1.84
LSM1O15116 RPL17P36-201ENST00000420302 549 ntBASIC3.58□□□□□ -1.84
LSM1O15116 AL390879.2-203ENST00000426943 1121 ntBASIC3.58□□□□□ -1.84
LSM1O15116 AL590399.6-201ENST00000446396 307 ntBASIC3.58□□□□□ -1.84
LSM1O15116 MTND3P4-201ENST00000453537 303 ntBASIC3.58□□□□□ -1.84
LSM1O15116 MRPL35P4-201ENST00000453682 566 ntBASIC3.58□□□□□ -1.84
LSM1O15116 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
LSM1O15116 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
LSM1O15116 AC073522.1-201ENST00000483312 377 ntBASIC3.58□□□□□ -1.84
LSM1O15116 AC093663.2-201ENST00000484625 313 ntBASIC3.58□□□□□ -1.84
LSM1O15116 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
LSM1O15116 HMGB3P15-201ENST00000507326 574 ntBASIC3.58□□□□□ -1.84
LSM1O15116 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.58□□□□□ -1.84
LSM1O15116 RN7SKP122-201ENST00000515923 296 ntBASIC3.58□□□□□ -1.84
LSM1O15116 RNU6-352P-201ENST00000516908 107 ntBASIC3.58□□□□□ -1.84
LSM1O15116 RNA5SP380-201ENST00000517190 98 ntBASIC3.58□□□□□ -1.84
LSM1O15116 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.58□□□□□ -1.84
LSM1O15116 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.58□□□□□ -1.84
LSM1O15116 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.58□□□□□ -1.84
LSM1O15116 AC010198.2-201ENST00000550612 259 ntBASIC3.58□□□□□ -1.84
LSM1O15116 OR4H12P-201ENST00000556269 907 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms