Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 HMGB1P37-201ENST00000439613 609 ntBASIC4.19□□□□□ -1.74
O00370 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.19□□□□□ -1.74
O00370 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
O00370 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.19□□□□□ -1.74
O00370 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.19□□□□□ -1.74
O00370 RPS4XP15-201ENST00000489210 795 ntBASIC4.19□□□□□ -1.74
O00370 RPL7P24-201ENST00000493052 752 ntBASIC4.19□□□□□ -1.74
O00370 AC096571.1-202ENST00000506634 735 ntBASIC4.19□□□□□ -1.74
O00370 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.19□□□□□ -1.74
O00370 RPL7L1P13-201ENST00000511702 739 ntBASIC4.19□□□□□ -1.74
O00370 AC005798.1-201ENST00000513715 387 ntBASIC4.19□□□□□ -1.74
O00370 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.19□□□□□ -1.74
O00370 AC008562.1-201ENST00000521763 330 ntBASIC4.19□□□□□ -1.74
O00370 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.19□□□□□ -1.74
O00370 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.19□□□□□ -1.74
O00370 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.19□□□□□ -1.74
O00370 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.19□□□□□ -1.74
O00370 AC091057.3-201ENST00000602684 733 ntBASIC4.19□□□□□ -1.74
O00370 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.19□□□□□ -1.74
O00370 AC067959.1-201ENST00000604334 379 ntBASIC4.19□□□□□ -1.74
O00370 AC009948.4-201ENST00000604692 675 ntBASIC4.19□□□□□ -1.74
O00370 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.19□□□□□ -1.74
O00370 AC018754.1-201ENST00000607486 925 ntBASIC4.19□□□□□ -1.74
O00370 AC092653.1-201ENST00000608509 531 ntBASIC4.19□□□□□ -1.74
O00370 AC013468.1-201ENST00000608680 598 ntBASIC4.19□□□□□ -1.74
O00370 AC093673.2-201ENST00000609674 331 ntBASIC4.19□□□□□ -1.74
O00370 MIR6500-201ENST00000622700 86 ntBASIC4.19□□□□□ -1.74
O00370 AC244205.2-202ENST00000635781 342 ntBASIC4.19□□□□□ -1.74
O00370 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
O00370 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
O00370 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
O00370 ZNF33CP-201ENST00000432492 2030 ntBASIC4.19□□□□□ -1.74
O00370 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
O00370 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
O00370 AC104446.1-201ENST00000613728 1321 ntBASIC4.19□□□□□ -1.74
O00370 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
O00370 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
O00370 MTND4P10-201ENST00000446199 1363 ntBASIC4.18□□□□□ -1.74
O00370 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
O00370 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
O00370 MIR423-201ENST00000362201 94 ntBASIC4.18□□□□□ -1.74
O00370 RNA5SP515-201ENST00000364570 118 ntBASIC4.18□□□□□ -1.74
O00370 Y_RNA.578-201ENST00000390903 88 ntBASIC4.18□□□□□ -1.74
O00370 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
O00370 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.18□□□□□ -1.74
O00370 AL449283.1-202ENST00000418249 604 ntBASIC4.18□□□□□ -1.74
O00370 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.18□□□□□ -1.74
O00370 AC114973.1-201ENST00000429057 632 ntBASIC4.18□□□□□ -1.74
O00370 RPL37P1-201ENST00000432310 284 ntBASIC4.18□□□□□ -1.74
O00370 AC096638.2-201ENST00000434965 711 ntBASIC4.18□□□□□ -1.74
O00370 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.18□□□□□ -1.74
O00370 UBE2V1P5-201ENST00000440070 405 ntBASIC4.18□□□□□ -1.74
O00370 SEPT14P24-201ENST00000447236 180 ntBASIC4.18□□□□□ -1.74
O00370 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.18□□□□□ -1.74
O00370 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.18□□□□□ -1.74
O00370 RNU7-140P-201ENST00000459546 60 ntBASIC4.18□□□□□ -1.74
O00370 RN7SL93P-201ENST00000463035 293 ntBASIC4.18□□□□□ -1.74
O00370 RPS20P21-201ENST00000466859 343 ntBASIC4.18□□□□□ -1.74
O00370 AL035404.1-201ENST00000497982 568 ntBASIC4.18□□□□□ -1.74
O00370 UBE2V1P12-201ENST00000503954 474 ntBASIC4.18□□□□□ -1.74
O00370 Vault.1-201ENST00000516474 102 ntBASIC4.18□□□□□ -1.74
O00370 AC091163.3-201ENST00000518269 1144 ntBASIC4.18□□□□□ -1.74
O00370 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.18□□□□□ -1.74
O00370 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.18□□□□□ -1.74
O00370 AC010306.1-201ENST00000523223 1117 ntBASIC4.18□□□□□ -1.74
O00370 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.18□□□□□ -1.74
O00370 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.18□□□□□ -1.74
O00370 AC007424.1-203ENST00000554613 687 ntBASIC4.18□□□□□ -1.74
O00370 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.18□□□□□ -1.74
O00370 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.18□□□□□ -1.74
O00370 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.18□□□□□ -1.74
O00370 MIR3160-1-201ENST00000577972 85 ntBASIC4.18□□□□□ -1.74
O00370 MIR4509-3-201ENST00000578671 94 ntBASIC4.18□□□□□ -1.74
O00370 MIR4509-2-201ENST00000583920 94 ntBASIC4.18□□□□□ -1.74
O00370 AC110741.2-201ENST00000605278 268 ntBASIC4.18□□□□□ -1.74
O00370 AC026790.2-201ENST00000606282 430 ntBASIC4.18□□□□□ -1.74
O00370 AC121761.2-201ENST00000617300 689 ntBASIC4.18□□□□□ -1.74
O00370 MIR4509-1-201ENST00000618224 94 ntBASIC4.18□□□□□ -1.74
O00370 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
O00370 OR4G3P-201ENST00000633500 913 ntBASIC4.18□□□□□ -1.74
O00370 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.18□□□□□ -1.74
O00370 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.18□□□□□ -1.74
O00370 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
O00370 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.18□□□□□ -1.74
O00370 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
O00370 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
O00370 NMD3P1-201ENST00000439704 1488 ntBASIC4.18□□□□□ -1.74
O00370 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.17□□□□□ -1.74
O00370 LINC00561-201ENST00000565815 2738 ntBASIC4.17□□□□□ -1.74
O00370 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.17□□□□□ -1.74
O00370 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
O00370 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
O00370 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.17□□□□□ -1.74
O00370 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
O00370 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.17□□□□□ -1.74
O00370 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
O00370 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
O00370 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.17□□□□□ -1.74
O00370 RNU1-18P-201ENST00000363062 164 ntBASIC4.17□□□□□ -1.74
O00370 MIR3074-201ENST00000384885 81 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms