Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC010329.1-201ENST00000593903 8328 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AL359195.2-201ENST00000623657 4412 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 Y_RNA.233-201ENST00000364407 101 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RNA5SP205-201ENST00000364653 136 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-1035P-201ENST00000384477 107 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 SNORA69.1-201ENST00000390904 137 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 Y_RNA.597-201ENST00000410463 100 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-1135P-201ENST00000411083 103 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RPL23AP36-201ENST00000413895 458 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RPSAP60-201ENST00000415403 880 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 FTLP17-201ENST00000432567 525 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 ELOCP18-201ENST00000434209 337 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AC073410.1-201ENST00000435125 589 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AC008267.6-201ENST00000441664 139 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AL354714.5-201ENST00000450131 590 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 GAPDHP53-201ENST00000458397 924 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AC018437.1-201ENST00000492214 406 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-1092P-201ENST00000516955 87 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 SOD1P3-201ENST00000518682 454 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AC007537.1-201ENST00000539347 327 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SL42P-201ENST00000579786 294 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AL596245.1-201ENST00000618994 362 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 AP005212.3-201ENST00000619964 528 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VPS9D1Q9Y2B5 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VPS9D1Q9Y2B5 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VPS9D1Q9Y2B5 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VPS9D1Q9Y2B5 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AL121950.1-201ENST00000624993 2077 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 RNU6-708P-201ENST00000384217 107 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 Y_RNA.458-201ENST00000384240 102 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 Y_RNA.541-201ENST00000384640 113 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AL023284.3-201ENST00000407767 334 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 BX842559.1-201ENST00000419615 532 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 SRP68P2-201ENST00000456184 254 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 SNORD97-201ENST00000459187 142 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC087190.1-201ENST00000484462 480 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC107032.1-201ENST00000485945 480 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC093853.1-201ENST00000515689 483 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 IGLC4-201ENST00000517690 248 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 OR5BK1P-201ENST00000550421 823 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC063949.1-201ENST00000552900 865 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AMZ2P1-203ENST00000565833 850 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC007619.2-201ENST00000605743 379 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AL450226.2-201ENST00000622913 439 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC020658.2-201ENST00000559030 4020 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 AC090220.1-201ENST00000593078 1699 ntBASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
VPS9D1Q9Y2B5 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms