Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.34□□□□□ -1.88
CLCF1Q9UBD9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.34□□□□□ -1.88
CLCF1Q9UBD9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.34□□□□□ -1.88
CLCF1Q9UBD9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.34□□□□□ -1.88
CLCF1Q9UBD9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 MAPK10-253ENST00000641010 4072 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC046144.1-201ENST00000478559 1853 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 RPL7P60-201ENST00000397636 735 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 RN7SKP56-201ENST00000410513 331 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC004022.2-201ENST00000413824 193 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 MTND2P11-201ENST00000423638 648 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC091286.1-201ENST00000431233 461 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC105402.2-201ENST00000438503 358 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC092809.1-201ENST00000441469 474 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC006480.1-201ENST00000449887 378 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC018635.1-201ENST00000468292 1030 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 S100A11P1-201ENST00000477525 312 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 MTCO2P9-201ENST00000503214 694 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC008494.2-201ENST00000514544 370 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 RN7SKP82-201ENST00000516786 223 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 RNU6-467P-201ENST00000517027 110 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC113192.3-201ENST00000529152 742 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AP003717.3-201ENST00000544832 1180 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC007424.1-203ENST00000554613 687 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AL161713.1-201ENST00000555538 145 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AL392112.1-201ENST00000605115 829 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC110741.2-201ENST00000605278 268 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC096586.1-201ENST00000610267 561 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC006213.5-201ENST00000619673 288 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AP003400.6-201ENST00000624698 740 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AL590396.2-201ENST00000636511 1041 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AC104446.1-201ENST00000613728 1321 ntBASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCF1Q9UBD9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 RNU6-1339P-201ENST00000363574 91 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 RNA5SP424-201ENST00000390988 115 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 HLFP1-201ENST00000402375 499 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 UBE2D3P3-201ENST00000426992 425 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 RPS3AP46-201ENST00000448352 682 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC034236.1-201ENST00000469891 373 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 HMGB1P21-201ENST00000502313 581 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 OR5H3P-201ENST00000502817 919 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 MTATP6P22-201ENST00000507369 598 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC121161.1-201ENST00000510606 652 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 RN7SKP18-201ENST00000516005 275 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 MIR2114-201ENST00000516645 80 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 OR7E13P-201ENST00000526052 910 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 OR4R2P-201ENST00000530815 597 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 MIR4458-201ENST00000578872 75 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC124283.4-201ENST00000581815 456 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC015911.5-201ENST00000587076 451 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC005776.1-201ENST00000603164 290 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms