Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.13□□□□□ -1.91
CHD7Q9P2D1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.13□□□□□ -1.91
CHD7Q9P2D1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
CHD7Q9P2D1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC3.13□□□□□ -1.91
CHD7Q9P2D1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD7Q9P2D1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHD7Q9P2D1 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD7Q9P2D1 DUTP6-201ENST00000425573 462 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AC233309.1-201ENST00000619522 751 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 RPL7P8-201ENST00000411964 730 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AC006989.1-201ENST00000427212 131 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 NIPA2P5-201ENST00000452282 464 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AP001207.2-201ENST00000519490 539 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 SEPT7P2-202ENST00000398921 823 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 YWHAEP5-201ENST00000431545 765 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 MTND2P25-201ENST00000449028 610 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 RPL31P13-201ENST00000484151 370 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 SERPINE4P-201ENST00000554978 281 ntBASIC3.12□□□□□ -1.91
CHD7Q9P2D1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CHD7Q9P2D1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AC017071.1-201ENST00000564407 2204 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 OR1S2-201ENST00000302592 978 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 U3.42-201ENST00000408746 214 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 ATP5F1P7-201ENST00000567330 760 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AC009159.1-201ENST00000618386 642 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AC007336.1-201ENST00000576365 3828 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AC087190.4-201ENST00000574616 8334 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 snoU13.23-201ENST00000458863 104 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 UBL5P3-201ENST00000475112 231 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 MIR6817-201ENST00000615588 66 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.11□□□□□ -1.91
CHD7Q9P2D1 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
CHD7Q9P2D1 TCP1P3-201ENST00000414406 1498 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AC025445.1-201ENST00000502728 300 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AP000873.5-201ENST00000533906 236 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 uc_338.32-201ENST00000615087 172 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AC125336.1-201ENST00000508893 2827 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 U3.23-201ENST00000391132 200 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 RNA5SP21-201ENST00000410917 96 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 IFNA11P-201ENST00000446352 526 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 MTND5P24-201ENST00000438892 1767 ntBASIC3.1□□□□□ -1.91
CHD7Q9P2D1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD7Q9P2D1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms