Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 MTND3P19-201ENST00000603825 345 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC009948.4-201ENST00000604692 675 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC009237.15-201ENST00000610252 501 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC100827.5-201ENST00000615883 426 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AL391261.4-201ENST00000616012 481 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AP001784.1-201ENST00000624107 428 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 ATE1-AS1-202ENST00000636460 506 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AL139811.1-201ENST00000424779 2299 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 DHX40P1-201ENST00000588725 1412 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 ANKRD36P1-201ENST00000344424 659 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 RNU6-317P-201ENST00000384031 107 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 MIR513B-201ENST00000385136 84 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 RN7SKP182-201ENST00000410772 298 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 RAC1P8-201ENST00000427086 527 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC092017.2-201ENST00000427600 362 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 HIGD1AP4-201ENST00000430194 280 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 MTCO3P21-201ENST00000430791 643 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC006466.1-201ENST00000438721 289 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 CBX1P4-201ENST00000439415 457 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AL592437.1-201ENST00000443781 492 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 RPS29P31-201ENST00000446147 164 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 RPL35AP28-201ENST00000459730 331 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 RNA5SP49-201ENST00000516450 115 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC090888.2-201ENST00000559765 1144 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 NIFKP8-201ENST00000560500 874 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AL583856.2-201ENST00000606298 543 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AL049539.1-201ENST00000611964 459 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 VN1R74P-201ENST00000613259 503 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC008121.2-201ENST00000614647 523 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AL121895.2-201ENST00000619558 447 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AP000843.1-201ENST00000624880 701 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AC097655.1-201ENST00000635075 318 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.81□□□□□ -1.8
NDE1Q9NXR1 AL158163.1-201ENST00000603915 1649 ntBASIC3.81□□□□□ -1.8
NDE1Q9NXR1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC066616.2-201ENST00000559334 1481 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 SEPT7P7-201ENST00000420492 1301 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RNU6-1339P-201ENST00000363574 91 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 MIR184-201ENST00000384962 84 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 MIR525-201ENST00000384978 85 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RNU4-25P-201ENST00000410569 230 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 HIGD1AP15-201ENST00000416198 280 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RPS3AP37-201ENST00000419176 745 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms