Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC106871.1-201ENST00000568324 3102 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 FRG1CP-201ENST00000358464 769 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 RNU6-1005P-201ENST00000384519 107 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 HMGB3P18-201ENST00000406327 590 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 HNRNPDP2-201ENST00000406475 478 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 RN7SKP177-201ENST00000410567 355 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 MTND4P22-201ENST00000413116 1169 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 RPL21P109-201ENST00000422213 475 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 SDCBPP2-201ENST00000424643 885 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 IFNNP1-201ENST00000429219 553 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AL050321.1-201ENST00000432363 400 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 RPS7P5-201ENST00000441482 581 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 RPL26P28-201ENST00000451325 435 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 CYCSP35-201ENST00000451978 304 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 MTND2P30-201ENST00000456663 382 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 RPL7P49-201ENST00000471402 708 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 RN7SKP82-201ENST00000516786 223 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 SNORA76.2-201ENST00000517095 137 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC007458.1-201ENST00000542812 373 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC099489.2-201ENST00000574976 260 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 NTAN1P1-201ENST00000603150 646 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC079880.2-201ENST00000603790 1213 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC019176.2-201ENST00000611579 315 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 AL627171.1-201ENST00000618845 1308 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.12□□□□□ -1.75
VAT1LQ9HCJ6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 RNA5SP391-201ENST00000363456 119 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 UBE2V1P11-201ENST00000411559 285 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 RPS6P4-201ENST00000494693 758 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC010468.3-201ENST00000508225 458 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC110792.2-201ENST00000510278 224 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC005798.1-201ENST00000513715 387 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 RN7SKP283-201ENST00000517197 270 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC103843.2-201ENST00000530523 682 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AL392112.1-201ENST00000605115 829 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC092354.2-201ENST00000607786 514 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC012314.7-201ENST00000619693 93 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC091948.2-201ENST00000636510 279 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 AC009452.1-201ENST00000640823 606 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 LINC00561-201ENST00000565815 2738 ntBASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.11□□□□□ -1.75
VAT1LQ9HCJ6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 RNU6-796P-201ENST00000391086 107 ntBASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 HMGB3P31-201ENST00000413333 595 ntBASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 AC017079.2-201ENST00000416102 485 ntBASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 CYCSP4-201ENST00000429682 331 ntBASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 MOB1AP1-201ENST00000430903 535 ntBASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 AF228730.2-201ENST00000438784 848 ntBASIC4.1□□□□□ -1.75
VAT1LQ9HCJ6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms