Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AP000949.1-201ENST00000438328 629 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC010655.1-201ENST00000449336 292 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 SNORD108-201ENST00000459332 71 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 RN7SKP157-201ENST00000516174 282 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AL034351.1-201ENST00000605288 668 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AL590410.1-201ENST00000617925 333 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC244100.1-202ENST00000621554 382 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 CEP170P1-201ENST00000502249 4587 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 SPATA2P1-201ENST00000431223 2055 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RNU1-87P-201ENST00000363727 170 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 MIR124-3-201ENST00000384866 87 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RNU6-328P-201ENST00000390887 106 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 FAR1P1-201ENST00000427163 934 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 MTND4LP7-201ENST00000431728 294 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RPS3AP46-201ENST00000448352 682 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RPL12P26-201ENST00000452430 487 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC010401.1-201ENST00000463867 348 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AP000563.1-201ENST00000490865 758 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC020893.1-201ENST00000502452 580 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 MTND1P36-201ENST00000522384 936 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 TGIF1P1-201ENST00000558095 802 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC106785.3-201ENST00000564064 847 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC008507.1-201ENST00000587506 734 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC007687.1-201ENST00000602704 304 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AC069200.1-201ENST00000609511 323 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 AL162233.1-201ENST00000620014 944 ntBASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO3Q9BXY4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 Y_RNA.110-201ENST00000363220 99 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 RNU6-883P-201ENST00000384597 107 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 MIR483-201ENST00000385070 76 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AC091390.3-201ENST00000426478 338 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 YME1L1P1-201ENST00000429435 297 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AL445584.1-201ENST00000431451 330 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 RPL21P110-201ENST00000433345 446 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 BX679664.1-201ENST00000434429 253 ntBASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.22□□□□□ -1.89
RSPO3Q9BXY4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms