Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
PHOX2BQ99453 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PHOX2BQ99453 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PHOX2BQ99453 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.84□□□□□ -1.32
PHOX2BQ99453 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
PHOX2BQ99453 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.84□□□□□ -1.32
PHOX2BQ99453 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.84□□□□□ -1.32
PHOX2BQ99453 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
PHOX2BQ99453 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.84□□□□□ -1.32
PHOX2BQ99453 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.32
PHOX2BQ99453 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC097461.1-201ENST00000568928 2821 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 RNVU1-3-201ENST00000364313 161 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 Y_RNA.461-201ENST00000384263 103 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 RNU6-33P-201ENST00000384793 107 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 MIR585-201ENST00000384887 94 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 SNORA16.2-201ENST00000390991 127 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 RPL31P2-201ENST00000413849 377 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 AL590632.1-201ENST00000424289 371 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AL591704.1-201ENST00000432574 275 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 OR3D1P-201ENST00000438288 955 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC011742.2-201ENST00000443818 352 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC010733.1-201ENST00000451515 401 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 RNU6-1023P-201ENST00000516137 106 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC007225.2-201ENST00000562529 256 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 MIR1273E-201ENST00000581165 102 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC174048.1-201ENST00000603389 144 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 AL161423.1-201ENST00000613700 262 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 AC123769.1-201ENST00000530992 3192 ntBASIC6.83□□□□□ -1.32
PHOX2BQ99453 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PHOX2BQ99453 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.83□□□□□ -1.32
PHOX2BQ99453 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PHOX2BQ99453 TATDN2P3-201ENST00000452855 3665 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PHOX2BQ99453 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 HSPA8P11-201ENST00000508840 1898 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PHOX2BQ99453 OR56A5-201ENST00000340110 738 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 RN7SKP162-201ENST00000363605 345 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 SNORA20.1-201ENST00000364790 130 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 U3.52-201ENST00000384034 216 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 RNU6-637P-201ENST00000384050 107 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 Y_RNA.512-201ENST00000384518 102 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL391361.1-201ENST00000405580 489 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 RPL12P34-201ENST00000424532 479 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 RPL7P37-201ENST00000425095 738 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL360081.1-201ENST00000428299 555 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 OR1H1P-201ENST00000448731 937 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC026254.2-201ENST00000475295 371 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 RPL30P11-201ENST00000495304 339 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC114801.2-201ENST00000503825 781 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC025458.1-201ENST00000506046 166 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 RBBP4P6-201ENST00000508098 202 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 IGHV3-76-201ENST00000522465 295 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 IGLVI-42-201ENST00000522485 381 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AP001922.4-201ENST00000526967 290 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms