Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RN7SKP185-201ENST00000362813 326 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.419-201ENST00000384041 102 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RNU6-332P-201ENST00000391193 108 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 SNRPEP2-201ENST00000397592 279 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AL121972.1-201ENST00000402023 252 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC073264.1-201ENST00000411508 416 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RIMKLBP2-201ENST00000424737 654 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 MTCO2P12-201ENST00000427426 682 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RPL7P54-201ENST00000438336 674 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 REG1CP-206ENST00000447469 496 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RPS20P20-201ENST00000460498 340 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC097493.1-201ENST00000463958 372 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC023598.1-201ENST00000472521 361 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 FAM172BP-201ENST00000487497 1089 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RNU2-46P-201ENST00000517038 113 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AP003467.2-201ENST00000520175 319 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC027309.2-201ENST00000520566 192 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 HPRT1P3-201ENST00000539521 576 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC078814.3-201ENST00000553036 491 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AP001180.3-201ENST00000582221 145 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC013553.2-201ENST00000604244 589 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 Z98200.1-201ENST00000607298 470 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC241377.1-201ENST00000619797 406 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC015871.5-202ENST00000623252 701 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RNF6P1-201ENST00000444889 1784 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 NLRP3P1-201ENST00000622303 1785 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC006206.1-201ENST00000544842 3387 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 CASC19-221ENST00000641309 1382 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 RNU1-85P-201ENST00000364127 164 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 RNVU1-6-201ENST00000364688 164 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.326-201ENST00000365176 113 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 RNU6-878P-201ENST00000384578 110 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AL049693.1-201ENST00000402760 611 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AL390316.1-201ENST00000406279 553 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AL603766.1-201ENST00000407763 664 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC211486.3-201ENST00000412694 621 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 MTND2P23-201ENST00000422990 651 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AL354766.1-201ENST00000423396 542 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 SETP9-201ENST00000423837 832 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 OR4F13P-201ENST00000428478 931 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC109583.1-201ENST00000432156 268 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC140076.1-201ENST00000449897 361 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 Z92846.1-201ENST00000456203 268 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 RPL7AP52-201ENST00000458096 790 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC022034.3-201ENST00000471393 478 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC093809.1-201ENST00000509155 340 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.672-201ENST00000516289 104 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 RNA5SP373-201ENST00000517271 95 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC243972.3-201ENST00000539655 198 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 DUX4L52-201ENST00000549363 777 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 HMGN1P30-201ENST00000589286 268 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 MIR98-201ENST00000606724 119 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC011816.2-201ENST00000607089 556 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AL365204.3-201ENST00000612448 685 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AC002550.2-201ENST00000621246 394 ntBASIC6.1□□□□□ -1.43
SYNGAP1Q96PV0 AL160413.1-201ENST00000622780 310 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms