Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC106872.3-201ENST00000495104 446 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 RNU4-49P-201ENST00000516080 140 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 Y_RNA.718-201ENST00000517110 102 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC078899.1-201ENST00000521432 1185 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AP003122.3-201ENST00000526316 255 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 PSMA2P1-201ENST00000526365 646 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AP003181.2-201ENST00000528941 181 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 NUTF2P8-201ENST00000604593 363 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC008966.2-201ENST00000606157 453 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 HMGB1P24-202ENST00000615653 685 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AL034546.1-201ENST00000623740 3693 ntBASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHKBP1Q8TBC3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 RPL7P26-201ENST00000333817 754 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 Y_RNA.231-201ENST00000364358 102 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-769P-201ENST00000384407 104 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 MIR223-201ENST00000385204 110 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-1106P-201ENST00000390845 107 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC005042.1-201ENST00000393397 800 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 NDUFB4P5-201ENST00000415445 361 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 SLC35E1P1-201ENST00000419313 864 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 PMCHL1-202ENST00000423102 261 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 SRIP2-201ENST00000428470 166 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 MTCO1P27-201ENST00000448269 226 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 MEMO1P4-201ENST00000453590 386 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC135999.1-201ENST00000478962 479 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC105417.1-201ENST00000514691 285 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC026801.2-201ENST00000515352 425 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 SNORD60.2-201ENST00000516883 86 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-1314P-201ENST00000517139 104 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 RN7SKP256-201ENST00000517201 314 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC126177.5-201ENST00000549599 178 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AL049779.2-201ENST00000553847 315 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC079075.1-201ENST00000559543 878 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 MIR4311-201ENST00000580794 100 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 TPMTP1-201ENST00000592307 737 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC006115.2-201ENST00000596823 202 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC115621.1-201ENST00000604653 858 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC084781.2-201ENST00000615568 161 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 MIR6730-201ENST00000622213 67 ntBASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHKBP1Q8TBC3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SHKBP1Q8TBC3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
SHKBP1Q8TBC3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
SHKBP1Q8TBC3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHKBP1Q8TBC3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHKBP1Q8TBC3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms