Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AP000553.6-201ENST00000641242 118 ntBASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 AL163152.1-201ENST00000642001 374 ntBASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 AP004289.2-201ENST00000444413 1457 ntBASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC50Q8IVM0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 PTMAP5-201ENST00000393073 333 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 HMGB3P18-201ENST00000406327 590 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 RNA5SP293-201ENST00000410527 113 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC004987.3-201ENST00000413879 771 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC006989.1-201ENST00000427212 131 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AL591419.1-201ENST00000427423 339 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 MRPS18BP2-201ENST00000434310 759 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC105402.2-201ENST00000438503 358 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 CFTRP1-201ENST00000456646 183 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 RPL37P3-201ENST00000456825 293 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 RN7SL442P-201ENST00000473804 320 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 VN1R105P-201ENST00000486595 910 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 RPS3AP50-201ENST00000487064 803 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 RPL23AP73-201ENST00000492507 471 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC021146.5-201ENST00000503544 545 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC022790.1-201ENST00000522872 204 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 MTND5P21-201ENST00000531961 522 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 UBE2NP1-201ENST00000545592 458 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC023161.2-201ENST00000551218 780 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC025918.2-201ENST00000558683 763 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AL845331.3-202ENST00000562856 261 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 CDRT1-208ENST00000630868 794 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AL732372.2-225ENST00000642124 456 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AC007656.2-201ENST00000624902 4547 ntBASIC3.82□□□□□ -1.8
CCDC50Q8IVM0 AL513302.2-201ENST00000562313 1842 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 RNA5SP235-201ENST00000365411 114 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AL136116.1-201ENST00000403591 381 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 RPS7P13-201ENST00000413955 498 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 OR4F13P-201ENST00000428478 931 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AL158071.1-201ENST00000430315 461 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AL645931.1-201ENST00000439737 410 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 CEACAMP10-202ENST00000495431 496 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 TRAV31-201ENST00000502780 342 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 Vault.1-201ENST00000516474 102 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AC037471.2-201ENST00000564941 598 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AC090751.1-201ENST00000566966 267 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 MIR4286-201ENST00000580651 93 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AP001180.3-201ENST00000582221 145 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AC099669.2-201ENST00000616549 437 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 AL354798.1-201ENST00000622505 329 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 MTND5P27-201ENST00000428871 1720 ntBASIC3.81□□□□□ -1.8
CCDC50Q8IVM0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms