Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CSMD2Q7Z408 ELF2P3-201ENST00000445099 1506 ntBASIC2.51□□□□□ -2.01
CSMD2Q7Z408 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD2Q7Z408 AL356968.1-201ENST00000416622 474 ntBASIC2.51□□□□□ -2.01
CSMD2Q7Z408 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD2Q7Z408 METTL15P1-201ENST00000481421 1045 ntBASIC2.51□□□□□ -2.01
CSMD2Q7Z408 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
CSMD2Q7Z408 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD2Q7Z408 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.51□□□□□ -2.01
CSMD2Q7Z408 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.51□□□□□ -2.01
CSMD2Q7Z408 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.51□□□□□ -2.01
CSMD2Q7Z408 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD2Q7Z408 AL079305.1-201ENST00000623159 3008 ntBASIC2.51□□□□□ -2.01
CSMD2Q7Z408 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 ATF1P1-201ENST00000406040 927 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 CST9LP2-201ENST00000437612 320 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AC112492.1-201ENST00000449607 712 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AC114967.1-201ENST00000504890 259 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 RFPL4AP3-201ENST00000515267 345 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 RNU6-548P-201ENST00000517083 115 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AC008638.3-201ENST00000603341 463 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AC105402.1-201ENST00000413336 545 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 SNRPGP5-201ENST00000456003 220 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 AL356321.1-201ENST00000621360 228 ntBASIC2.5□□□□□ -2.01
CSMD2Q7Z408 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD2Q7Z408 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 uc_338.1-201ENST00000612113 180 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 MIR6817-201ENST00000615588 66 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 RNU1-112P-201ENST00000364401 164 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 ANP32BP2-201ENST00000454525 545 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 KLHL2P1-201ENST00000508691 521 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC009977.1-201ENST00000586015 570 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC016727.1-205ENST00000605437 569 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 MTND5P24-201ENST00000438892 1767 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 RPL21P109-201ENST00000422213 475 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC092447.2-201ENST00000435487 669 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 ARL4AP1-201ENST00000503220 705 ntBASIC2.49□□□□□ -2.01
CSMD2Q7Z408 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD2Q7Z408 RNA5SP508-201ENST00000411327 119 ntBASIC2.48□□□□□ -2.01
CSMD2Q7Z408 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.48□□□□□ -2.01
CSMD2Q7Z408 AC044913.1-201ENST00000557200 430 ntBASIC2.48□□□□□ -2.01
CSMD2Q7Z408 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD2Q7Z408 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD2Q7Z408 AC134882.1-201ENST00000603738 1676 ntBASIC2.48□□□□□ -2.01
CSMD2Q7Z408 Z95331.1-201ENST00000623075 23112 ntBASIC2.48□□□□□ -2.01
CSMD2Q7Z408 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD2Q7Z408 RPS4XP7-201ENST00000406274 780 ntBASIC2.48□□□□□ -2.01
CSMD2Q7Z408 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.48□□□□□ -2.01
CSMD2Q7Z408 FAM103A2P-201ENST00000444122 354 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms