Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RGS17P1-201ENST00000423358 553 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AL121776.1-201ENST00000429337 372 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 C8orf59P1-201ENST00000429930 303 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 MTCO2P3-201ENST00000442543 421 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 RPL39P6-201ENST00000448289 150 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 SSXP1-201ENST00000453640 473 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC010460.1-201ENST00000507087 466 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC006499.2-201ENST00000513470 337 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 RNU6-150P-201ENST00000516237 95 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC012339.2-201ENST00000523996 453 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AL049779.2-201ENST00000553847 315 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 EIF1P4-201ENST00000572664 335 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC010680.3-201ENST00000604215 520 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC104687.2-201ENST00000604442 342 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AC087241.4-201ENST00000612441 480 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 AL672167.1-203ENST00000641299 2975 ntBASIC4.5□□□□□ -1.69
PTCHD4Q6ZW05 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 OR4G11P-202ENST00000642116 1414 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 RNU5F-6P-201ENST00000362979 116 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 RNU6-921P-201ENST00000384361 107 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 MIR143-201ENST00000385300 106 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 U3.25-201ENST00000391209 220 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 HMGB1P11-201ENST00000413899 637 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AL139128.1-201ENST00000413921 941 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AL389915.1-201ENST00000422463 466 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 FABP7P1-201ENST00000424004 391 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 RPL36P19-201ENST00000430744 301 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 OR52B5P-201ENST00000435337 951 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC004938.1-201ENST00000438468 308 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 RPS29P9-201ENST00000440360 171 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 VN1R10P-201ENST00000447106 875 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 MEMO1P3-201ENST00000459811 302 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC010301.1-201ENST00000473936 355 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC104763.1-201ENST00000475274 360 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 RPL7P51-201ENST00000490532 749 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC083829.1-201ENST00000503756 657 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC024558.1-201ENST00000505008 528 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC026412.2-201ENST00000512270 1075 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 BX510359.5-201ENST00000515651 304 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 RNA5SP216-201ENST00000516111 123 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 IGHV3-32-201ENST00000519182 355 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 DUXAP2-201ENST00000519198 589 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC022790.1-201ENST00000522872 204 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC245505.1-201ENST00000556398 224 ntBASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD4Q6ZW05 AP003465.2-201ENST00000602571 373 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms