Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 MTCO1P12-201ENST00000414273 1543 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF43Q68DV7 BCORP1-203ENST00000513194 5093 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC002525.1-201ENST00000624392 1622 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AP005435.3-201ENST00000531260 3198 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC007842.1-201ENST00000597336 2039 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 OR11H4-201ENST00000315409 1082 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC067945.1-201ENST00000342609 618 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF43Q68DV7 RNU6-223P-201ENST00000362830 107 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 RNU6-582P-201ENST00000362989 107 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 Y_RNA.231-201ENST00000364358 102 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 RPL11P3-201ENST00000395256 523 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 RPS4XP8-201ENST00000402039 771 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL450338.1-201ENST00000407987 512 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 MIR1286-201ENST00000408112 78 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 RNU4-61P-201ENST00000411243 107 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 NPM1P40-201ENST00000412758 733 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 BOLA3P4-201ENST00000418151 400 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 RPL21P110-201ENST00000433345 446 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC093716.1-201ENST00000435923 377 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 MTND2P29-201ENST00000438595 412 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 LSM1P1-201ENST00000438629 273 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 SUMO1P3-201ENST00000439961 304 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC023141.8-201ENST00000442554 208 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 CECR9-201ENST00000453421 199 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 BTF3P5-201ENST00000457252 467 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 MTND4P17-201ENST00000470444 350 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC074255.1-201ENST00000511259 501 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 RNU6-583P-201ENST00000516012 92 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 RNU6-615P-201ENST00000516065 106 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 RNA5SP92-201ENST00000516437 110 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 RNU6-1004P-201ENST00000516584 111 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC138832.1-201ENST00000522871 556 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 HMGB1P42-201ENST00000532126 553 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC096996.1-201ENST00000563813 325 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC010591.1-201ENST00000603941 649 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL133338.2-201ENST00000604292 736 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL359999.1-201ENST00000604513 294 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 AC233309.1-201ENST00000619522 751 ntBASIC5.93□□□□□ -1.46
RNF43Q68DV7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF43Q68DV7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RNF43Q68DV7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF43Q68DV7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF43Q68DV7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF43Q68DV7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF43Q68DV7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF43Q68DV7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF43Q68DV7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF43Q68DV7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RNF43Q68DV7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RNF43Q68DV7 AC025574.1-201ENST00000554784 1653 ntBASIC5.92□□□□□ -1.46
RNF43Q68DV7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF43Q68DV7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF43Q68DV7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF43Q68DV7 Y_RNA.25-201ENST00000362528 102 ntBASIC5.92□□□□□ -1.46
RNF43Q68DV7 Y_RNA.31-201ENST00000362574 102 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms