Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MRPS21P9-201ENST00000571150 257 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC006363.1-201ENST00000603806 463 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC009570.1-201ENST00000609599 745 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC006213.6-201ENST00000623722 4179 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 MSL3P1-202ENST00000440028 1468 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 Y_RNA.151-201ENST00000363566 112 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 Y_RNA.215-201ENST00000364204 112 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 RNA5SP140-201ENST00000364524 92 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 EIF5P1-201ENST00000400019 1231 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 RPL23AP74-201ENST00000437246 471 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 GAPDHP37-201ENST00000442317 968 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 PPIAP27-201ENST00000453800 265 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 AC079168.2-201ENST00000453977 416 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 OARD1-209ENST00000471367 401 ntTSL 2 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 RPS26P24-201ENST00000497656 331 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 OR51K1P-201ENST00000510214 950 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 RNU6-426P-201ENST00000516464 97 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 IGHVII-62-1-201ENST00000519283 235 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 CYCSP26-201ENST00000534107 320 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 AC010186.2-204ENST00000537668 439 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 AC087575.1-201ENST00000585087 229 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 uc_338.29-201ENST00000615099 168 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 MIR6729-201ENST00000618194 65 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 AC005614.1-201ENST00000598952 3653 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 CTAGE11P-201ENST00000451540 2353 ntBASIC7.22□□□□□ -1.25
VARS2Q5ST30 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VARS2Q5ST30 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.21□□□□□ -1.25
VARS2Q5ST30 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
VARS2Q5ST30 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
VARS2Q5ST30 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
VARS2Q5ST30 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
VARS2Q5ST30 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
VARS2Q5ST30 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.21□□□□□ -1.26
VARS2Q5ST30 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VARS2Q5ST30 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
VARS2Q5ST30 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VARS2Q5ST30 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
VARS2Q5ST30 Y_RNA.44-201ENST00000362676 108 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 RNA5SP321-201ENST00000362722 111 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 Y_RNA.218-201ENST00000364218 104 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 RN7SKP124-201ENST00000364730 341 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 Y_RNA.309-201ENST00000365046 111 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 SNORD116-14-201ENST00000383894 92 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 SNORD116-17-201ENST00000383929 92 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 RNU6-1207P-201ENST00000384343 107 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 SNORD116-15-201ENST00000384445 92 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 SNORD116-20-201ENST00000384529 92 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 SNORD116-19-201ENST00000384729 92 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 RNA5SP115-201ENST00000411160 107 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 RNU5E-9P-201ENST00000411164 104 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 RAB28P5-201ENST00000427490 651 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 AC108734.1-201ENST00000439549 399 ntBASIC7.21□□□□□ -1.26
VARS2Q5ST30 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms