Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC079416.3-201ENST00000624479 549 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC017037.3-201ENST00000625016 472 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC38Q502W7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC38Q502W7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC38Q502W7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC38Q502W7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 MTCO1P24-201ENST00000515438 1558 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 FAM3C2-201ENST00000312214 681 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 SNORD74.4-201ENST00000364129 80 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 RNU6-356P-201ENST00000384140 107 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 MIR1250-201ENST00000408098 113 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 MIR1284-201ENST00000408337 120 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 RSU1P3-201ENST00000412878 835 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 VPS26BP1-201ENST00000417155 755 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 RPS25P9-201ENST00000435591 252 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 OR1H1P-201ENST00000448731 937 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC104978.1-201ENST00000449387 391 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 PPIAP3-201ENST00000450588 505 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 TRGVB-201ENST00000453257 471 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC090142.1-201ENST00000465776 462 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 RPL7P16-201ENST00000479738 738 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 NDUFB5P1-201ENST00000508134 564 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC005798.1-201ENST00000513715 387 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 RNY4P37-201ENST00000516225 96 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 MIR4646-201ENST00000580775 63 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC004987.4-201ENST00000603383 338 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC103881.1-201ENST00000603476 538 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC38Q502W7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC38Q502W7 AL359893.1-201ENST00000447628 1580 ntBASIC4.74□□□□□ -1.65
CCDC38Q502W7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AL356489.2-201ENST00000566968 3528 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 OR5BR1P-201ENST00000524992 1330 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 ZNF734P-201ENST00000419494 1534 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 LINC00561-201ENST00000565815 2738 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC016769.3-201ENST00000396562 315 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 ARF4P3-201ENST00000397387 509 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 EIF5P1-201ENST00000400019 1231 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC136624.1-201ENST00000400791 413 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 OFD1P18Y-201ENST00000420889 959 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 YWHAZP7-201ENST00000436906 631 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 RPL23AP33-201ENST00000442301 452 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 MTND2P19-201ENST00000449129 1012 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 RPL26P28-201ENST00000451325 435 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 RPS5P7-201ENST00000456664 608 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC022034.3-201ENST00000471393 478 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 NCOR1P1-202ENST00000486162 291 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AP000676.2-201ENST00000529711 301 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC100770.1-201ENST00000532310 322 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 MIR4436B2-201ENST00000581415 91 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 MIR4436B1-201ENST00000583272 91 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms