Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC019278.1-201ENST00000623516 479 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 OR1S1-201ENST00000624470 978 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 U3.53-201ENST00000628922 216 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 AC099654.9-201ENST00000637055 678 ntBASIC3.88□□□□□ -1.79
SCN1BQ07699 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
SCN1BQ07699 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCN1BQ07699 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCN1BQ07699 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCN1BQ07699 AC139769.1-204ENST00000472297 1931 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.87□□□□□ -1.79
SCN1BQ07699 NUP58P1-201ENST00000502546 1738 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.87□□□□□ -1.79
SCN1BQ07699 FAM3C2-201ENST00000312214 681 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SCN1BQ07699 RNU6-1249P-201ENST00000363237 111 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 RNA5SP235-201ENST00000365411 114 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SCN1BQ07699 Y_RNA.472-201ENST00000384322 102 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 SNORA40.2-201ENST00000390847 128 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AL645927.1-201ENST00000396783 406 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 RPL31P1-201ENST00000398116 372 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 RN7SKP278-201ENST00000410504 342 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 RN7SKP100-201ENST00000411258 284 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AL161449.1-201ENST00000414531 1199 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC012497.1-201ENST00000429392 575 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 HSFY7P-201ENST00000432672 318 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.87□□□□□ -1.79
SCN1BQ07699 HSFY8P-201ENST00000437934 318 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AF228730.2-201ENST00000438784 848 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 USP9YP22-201ENST00000438971 294 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AL356535.1-201ENST00000440335 398 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 HMGB3P6-201ENST00000444896 598 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AL358794.1-201ENST00000445689 381 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 HSFY5P-201ENST00000453726 309 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AC010285.1-201ENST00000470580 392 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC006517.1-201ENST00000480485 328 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 SCARNA22-201ENST00000503991 125 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AC109458.1-201ENST00000508858 316 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.87□□□□□ -1.79
SCN1BQ07699 RNU6-1261P-201ENST00000517194 104 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AC092851.1-201ENST00000535964 478 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.87□□□□□ -1.79
SCN1BQ07699 BPIFA4P-203ENST00000603168 689 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 Z98200.1-201ENST00000607298 470 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC211433.2-201ENST00000608433 387 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 AC087385.3-201ENST00000620477 187 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN1BQ07699 GDI2P1-201ENST00000429312 1336 ntBASIC3.87□□□□□ -1.79
SCN1BQ07699 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCN1BQ07699 AL353746.1-201ENST00000566293 6881 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AP001350.1-201ENST00000601906 1524 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN1BQ07699 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SCN1BQ07699 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 Y_RNA.25-201ENST00000362528 102 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 SNORD116-12-201ENST00000384468 92 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 RNU6-925P-201ENST00000384629 104 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 U3.29-201ENST00000391296 212 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 ARF4P3-201ENST00000397387 509 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AL138878.1-201ENST00000405131 347 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 OR51B3P-201ENST00000412287 913 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN1BQ07699 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AL592293.2-201ENST00000422292 996 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 GTF2IP23-201ENST00000423746 351 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AC008072.1-201ENST00000434254 824 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AC005154.2-201ENST00000438110 379 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms