Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC015802.5-201ENST00000607478 399 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 AC027287.1-201ENST00000553115 1453 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF9P41273 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFSF9P41273 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
TNFSF9P41273 AC234772.1-201ENST00000377927 937 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 HMGB3P18-201ENST00000406327 590 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 RPS7P15-201ENST00000415804 584 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF9P41273 FTH1P6-201ENST00000430768 320 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 MTCO1P57-201ENST00000432182 261 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 AL357552.1-201ENST00000445254 415 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 FGF7P3-201ENST00000454645 303 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFSF9P41273 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFSF9P41273 AC090543.1-201ENST00000492168 485 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 AL358832.1-201ENST00000497800 389 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF9P41273 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF9P41273 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFSF9P41273 IGKV2-23-201ENST00000518729 323 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF9P41273 AC005476.1-201ENST00000554427 397 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFSF9P41273 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.7□□□□□ -1.82
TNFSF9P41273 AC037471.2-201ENST00000564941 598 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFSF9P41273 AL442067.2-201ENST00000614033 363 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF9P41273 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF9P41273 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF9P41273 AL513302.2-201ENST00000562313 1842 ntBASIC3.7□□□□□ -1.82
TNFSF9P41273 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF9P41273 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF9P41273 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF9P41273 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFSF9P41273 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TNFSF9P41273 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF9P41273 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF9P41273 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFSF9P41273 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 AL512504.1-201ENST00000415494 778 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 RPS12P23-201ENST00000419579 400 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 AC005300.1-201ENST00000428401 373 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 RPS6P12-201ENST00000432491 726 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 MRPS33P4-201ENST00000434892 317 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 HMGB1P5-202ENST00000451497 985 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 AP000926.1-201ENST00000479573 241 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 RPL30P11-201ENST00000495304 339 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 MTATP6P22-201ENST00000507369 598 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 AC010285.3-201ENST00000511668 676 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFSF9P41273 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFSF9P41273 RNU6-889P-201ENST00000517189 103 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFSF9P41273 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF9P41273 OR4R3P-201ENST00000525084 838 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 NCAPGP2-201ENST00000557911 754 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF9P41273 AC067852.4-201ENST00000590314 478 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 AP001542.1-201ENST00000591314 200 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFSF9P41273 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF9P41273 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.69□□□□□ -1.82
TNFSF9P41273 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF9P41273 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF9P41273 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFSF9P41273 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
TNFSF9P41273 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF9P41273 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF9P41273 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF9P41273 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
TNFSF9P41273 U3.15-201ENST00000365398 212 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 RNU4-31P-201ENST00000384211 141 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 RN7SKP111-201ENST00000410349 271 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFSF9P41273 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFSF9P41273 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFSF9P41273 ACTG1P13-201ENST00000486987 1043 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 CAB39P1-201ENST00000502277 460 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 DSTNP2-201ENST00000504533 515 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 FCF1P8-201ENST00000510322 597 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF9P41273 CYP2C60P-201ENST00000566088 139 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFSF9P41273 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFSF9P41273 MIR5195-201ENST00000583555 115 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 ZNF92P3-201ENST00000596594 954 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 AC069304.3-201ENST00000603938 1084 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 BNIP3P19-201ENST00000605397 577 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFSF9P41273 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF9P41273 AC018529.3-201ENST00000624212 2254 ntBASIC3.68□□□□□ -1.82
TNFSF9P41273 AC007529.1-201ENST00000418574 2178 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms