Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 USP9YP4-201ENST00000424401 1745 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SLC6A4P31645 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 MTCO1P14-201ENST00000441695 1559 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.92□□□□□ -1.62
SLC6A4P31645 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 AC079741.1-201ENST00000321498 212 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 RNA5SP505-201ENST00000364748 108 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AL356967.1-201ENST00000406305 431 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 CTSL3P-202ENST00000412179 788 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 RGS17P1-201ENST00000423358 553 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AL451139.1-201ENST00000434718 346 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC6A4P31645 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 BTF3P6-201ENST00000448054 499 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AL513533.1-201ENST00000453728 415 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AC104763.1-201ENST00000475274 360 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 BNIP3P41-201ENST00000503774 571 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 ENPP7P9-201ENST00000514456 627 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 RNU6-202P-201ENST00000515998 96 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 RNU6-513P-201ENST00000516104 104 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 RNU6-1178P-201ENST00000516674 107 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 SOD1P3-201ENST00000518682 454 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AP003392.2-201ENST00000527269 208 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 OR4A12P-201ENST00000530847 918 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC6A4P31645 GTF2IP22-201ENST00000554443 182 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 ZNF519P3-201ENST00000557158 1032 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AC079075.1-201ENST00000559543 878 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AC008687.2-201ENST00000597865 520 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC6A4P31645 AC234771.5-201ENST00000600161 514 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AC012065.4-201ENST00000602445 679 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 PSMA6P4-201ENST00000603247 718 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 AC091805.2-201ENST00000603848 235 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 AC012414.7-202ENST00000622705 1090 ntBASIC4.92□□□□□ -1.62
SLC6A4P31645 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC6A4P31645 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SLC6A4P31645 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC6A4P31645 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC6A4P31645 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 MAPK10-263ENST00000641052 4307 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC6A4P31645 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC6A4P31645 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC6A4P31645 OR10J6P-201ENST00000289731 930 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 SNRPEP3-201ENST00000338402 276 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 RNU6-433P-201ENST00000363216 104 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 RNU6-398P-201ENST00000384143 109 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC007066.1-201ENST00000392902 381 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 PRRC2CP1-201ENST00000404428 159 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 RNU2-28P-201ENST00000410457 189 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 RN7SKP33-201ENST00000410942 340 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 NPM1P40-201ENST00000412758 733 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC010881.1-201ENST00000433830 235 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 NMNAT1P2-201ENST00000435192 860 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 UBE2V1P3-201ENST00000439651 417 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC011753.3-201ENST00000443436 406 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 MTCO1P48-201ENST00000448024 1096 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 EPS15P1-201ENST00000448836 336 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC109927.2-201ENST00000506416 303 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC109464.2-201ENST00000510242 943 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms