Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXC6P09630 MRPS33P3-201ENST00000513456 322 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 AC091516.1-201ENST00000549191 703 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXC6P09630 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXC6P09630 AC018618.2-201ENST00000604770 446 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AL392112.1-201ENST00000605115 829 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC018638.7-201ENST00000605836 1114 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AP000255.1-201ENST00000610276 676 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC067852.7-201ENST00000623270 535 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC098679.4-201ENST00000624241 654 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXC6P09630 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC6P09630 LINC02211-204ENST00000642024 1070 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 PCAT14-202ENST00000627127 3935 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC6P09630 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
HOXC6P09630 AL445523.1-201ENST00000451184 1362 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 MTCO1P18-201ENST00000455518 1419 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXC6P09630 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC6P09630 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC6P09630 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC6P09630 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HOXC6P09630 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC6P09630 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC6P09630 AC067945.1-201ENST00000342609 618 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 SNORD113-6-201ENST00000363345 75 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC6P09630 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC6P09630 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC6P09630 RNU6-83P-201ENST00000384568 112 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC6P09630 MTCO1P56-201ENST00000401674 224 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC6P09630 RAP1BP1-201ENST00000412709 553 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 LINC01347-201ENST00000417964 355 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 ELOCP9-201ENST00000418624 239 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 AC093084.1-201ENST00000424233 687 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 RAC1P8-201ENST00000427086 527 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC6P09630 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC6P09630 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC6P09630 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 MTCYBP42-201ENST00000444653 1130 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 RPS11P1-201ENST00000451072 473 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AC005008.1-201ENST00000456151 612 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 RN7SL323P-201ENST00000494712 295 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AC108145.1-201ENST00000503770 153 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 KRT19P6-201ENST00000510983 209 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AC006499.6-201ENST00000511169 607 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 RNU1-95P-201ENST00000516357 160 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 RNU1-128P-201ENST00000516704 160 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC6P09630 AC008694.2-201ENST00000517591 306 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 AC010306.1-201ENST00000523223 1117 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AP000619.3-201ENST00000535634 1127 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 YPEL5P3-201ENST00000547227 352 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC6P09630 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC6P09630 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXC6P09630 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC6P09630 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC6P09630 AC016877.3-201ENST00000606778 504 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AP003392.5-201ENST00000607857 415 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 AC122108.2-201ENST00000611946 526 ntBASIC4.59□□□□□ -1.67
HOXC6P09630 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC6P09630 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC6P09630 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC6P09630 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
HOXC6P09630 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC6P09630 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC6P09630 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC6P09630 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HOXC6P09630 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC6P09630 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HOXC6P09630 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC6P09630 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC6P09630 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC6P09630 AC111188.2-201ENST00000529697 1387 ntBASIC4.58□□□□□ -1.68
HOXC6P09630 Y_RNA.436-201ENST00000384097 102 ntBASIC4.58□□□□□ -1.68
HOXC6P09630 MT-TP-201ENST00000387461 68 ntBASIC4.58□□□□□ -1.68
HOXC6P09630 HMGB3P18-201ENST00000406327 590 ntBASIC4.58□□□□□ -1.68
HOXC6P09630 VN1R8P-201ENST00000407739 893 ntBASIC4.58□□□□□ -1.68
HOXC6P09630 AL590084.1-201ENST00000407885 387 ntBASIC4.58□□□□□ -1.68
HOXC6P09630 TAF13P2-201ENST00000416876 286 ntBASIC4.58□□□□□ -1.68
HOXC6P09630 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms