Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPS27AP12-201ENST00000429552 465 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 NEK4P1-201ENST00000433383 879 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC023347.2-201ENST00000433994 462 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 ELOCP11-201ENST00000436690 332 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC2.59□□□□□ -1.99
CXCL1P09341 ELOCP16-201ENST00000444494 332 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC008264.1-201ENST00000447612 367 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.59□□□□□ -1.99
CXCL1P09341 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 AL133162.1-201ENST00000463228 453 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 RPS7P7-201ENST00000463499 571 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC092754.2-201ENST00000463506 460 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 RPL7P19-201ENST00000469948 618 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CXCL1P09341 TPT1P3-201ENST00000492841 512 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.59□□□□□ -1.99
CXCL1P09341 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.59□□□□□ -1.99
CXCL1P09341 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.59□□□□□ -1.99
CXCL1P09341 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.59□□□□□ -1.99
CXCL1P09341 AC025884.1-201ENST00000556034 378 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.59□□□□□ -1.99
CXCL1P09341 AL157394.1-201ENST00000562983 1224 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.59□□□□□ -1.99
CXCL1P09341 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.59□□□□□ -1.99
CXCL1P09341 AC006116.7-201ENST00000590141 756 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 AC004832.5-201ENST00000608677 401 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC055764.2-201ENST00000610089 670 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC112200.1-201ENST00000625015 234 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 LRRC77P-213ENST00000637727 880 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CXCL1P09341 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
CXCL1P09341 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CXCL1P09341 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CXCL1P09341 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
CXCL1P09341 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.59□□□□□ -2
CXCL1P09341 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.59□□□□□ -2
CXCL1P09341 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.59□□□□□ -2
CXCL1P09341 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.58□□□□□ -2
CXCL1P09341 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.58□□□□□ -2
CXCL1P09341 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CXCL1P09341 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CXCL1P09341 RNU6-673P-201ENST00000365084 104 ntBASIC2.58□□□□□ -2
CXCL1P09341 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CXCL1P09341 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.58□□□□□ -2
CXCL1P09341 MIR607-201ENST00000385241 96 ntBASIC2.58□□□□□ -2
CXCL1P09341 SNORA26.7-201ENST00000391288 122 ntBASIC2.58□□□□□ -2
CXCL1P09341 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.58□□□□□ -2
CXCL1P09341 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.58□□□□□ -2
CXCL1P09341 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.58□□□□□ -2
CXCL1P09341 OR8F1P-201ENST00000425243 930 ntBASIC2.58□□□□□ -2
CXCL1P09341 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.58□□□□□ -2
CXCL1P09341 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.58□□□□□ -2
CXCL1P09341 NOTCH2P1-201ENST00000443481 624 ntBASIC2.58□□□□□ -2
CXCL1P09341 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.58□□□□□ -2
CXCL1P09341 MTND2P8-201ENST00000450555 1025 ntBASIC2.58□□□□□ -2
CXCL1P09341 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.58□□□□□ -2
CXCL1P09341 RPL5P13-201ENST00000462840 709 ntBASIC2.58□□□□□ -2
CXCL1P09341 ST13P14-201ENST00000474095 734 ntBASIC2.58□□□□□ -2
CXCL1P09341 CDH12P2-201ENST00000504393 298 ntBASIC2.58□□□□□ -2
CXCL1P09341 AC110792.2-201ENST00000510278 224 ntBASIC2.58□□□□□ -2
CXCL1P09341 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.58□□□□□ -2
CXCL1P09341 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.58□□□□□ -2
CXCL1P09341 CENPUP2-201ENST00000555897 1186 ntBASIC2.58□□□□□ -2
CXCL1P09341 AC087499.8-201ENST00000578406 226 ntBASIC2.58□□□□□ -2
CXCL1P09341 AC023575.1-201ENST00000580510 358 ntBASIC2.58□□□□□ -2
CXCL1P09341 NPM1P45-201ENST00000583151 559 ntBASIC2.58□□□□□ -2
CXCL1P09341 KPNA2P3-201ENST00000584190 848 ntBASIC2.58□□□□□ -2
CXCL1P09341 AC068790.4-201ENST00000602474 263 ntBASIC2.58□□□□□ -2
CXCL1P09341 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 AL606490.9-201ENST00000603331 271 ntBASIC2.58□□□□□ -2
CXCL1P09341 AC091488.1-201ENST00000604239 660 ntBASIC2.58□□□□□ -2
CXCL1P09341 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 OR2BH1P-201ENST00000608850 864 ntBASIC2.58□□□□□ -2
CXCL1P09341 MIR6716-201ENST00000613413 80 ntBASIC2.58□□□□□ -2
CXCL1P09341 AC073348.1-201ENST00000623002 331 ntBASIC2.58□□□□□ -2
CXCL1P09341 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.58□□□□□ -2
CXCL1P09341 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.58□□□□□ -2
CXCL1P09341 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CXCL1P09341 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
CXCL1P09341 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CXCL1P09341 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CXCL1P09341 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 AC116096.1-201ENST00000566804 2314 ntBASIC2.57□□□□□ -2
CXCL1P09341 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.57□□□□□ -2
CXCL1P09341 AC026951.1-201ENST00000559530 2459 ntBASIC2.57□□□□□ -2
CXCL1P09341 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 SNORA70C-201ENST00000384538 135 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms