Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
ZIC3O60481 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 AC104118.1-201ENST00000607625 1589 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZIC3O60481 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
ZIC3O60481 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.06□□□□□ -1.76
ZIC3O60481 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 AC021242.1-201ENST00000507315 2035 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 SNRPEP3-201ENST00000338402 276 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 RNU1-130P-201ENST00000363930 160 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 RNA5SP151-201ENST00000365632 117 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 RNU6-657P-201ENST00000383904 107 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 RNU6-441P-201ENST00000384545 106 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 Y_RNA.560-201ENST00000384689 102 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 CYCSP45-201ENST00000402289 315 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 TMSB10P2-201ENST00000416049 131 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AL590609.2-201ENST00000421430 368 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.06□□□□□ -1.76
ZIC3O60481 RPL12P34-201ENST00000424532 479 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 SDCBPP2-201ENST00000424643 885 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 AL590103.1-201ENST00000434488 307 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZIC3O60481 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 MTND1P29-201ENST00000448112 647 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC009220.1-201ENST00000451614 275 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 MTCO3P11-201ENST00000455103 774 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 PPIAP21-201ENST00000464473 501 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC053481.1-201ENST00000467217 306 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 RPL7P1-201ENST00000468161 747 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 RPL7P9-201ENST00000468715 747 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 RN7SL481P-201ENST00000477764 299 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC013356.1-201ENST00000489027 564 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.06□□□□□ -1.76
ZIC3O60481 AC018797.3-201ENST00000513388 1241 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.06□□□□□ -1.76
ZIC3O60481 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.06□□□□□ -1.76
ZIC3O60481 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 OR7K1P-201ENST00000546439 926 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.06□□□□□ -1.76
ZIC3O60481 AC007954.1-201ENST00000554198 494 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 AC091178.1-203ENST00000584586 279 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.06□□□□□ -1.76
ZIC3O60481 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.06□□□□□ -1.76
ZIC3O60481 WISP1-OT1-201ENST00000602893 642 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AL590229.1-201ENST00000603497 542 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 HSPE1P14-201ENST00000605812 302 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC008966.2-201ENST00000606157 453 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC135507.1-201ENST00000607214 561 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AL451064.1-201ENST00000607718 471 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.06□□□□□ -1.76
ZIC3O60481 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.06□□□□□ -1.76
ZIC3O60481 PCMTD1P7-201ENST00000634506 357 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
ZIC3O60481 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.06□□□□□ -1.76
ZIC3O60481 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZIC3O60481 AL672167.1-203ENST00000641299 2975 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZIC3O60481 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.06□□□□□ -1.76
ZIC3O60481 AL451142.2-201ENST00000429076 2090 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 AC117529.2-201ENST00000512159 2068 ntBASIC4.06□□□□□ -1.76
ZIC3O60481 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZIC3O60481 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZIC3O60481 NXPH1-205ENST00000602349 1953 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 LINC01355-201ENST00000566551 5444 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC025031.4-201ENST00000621248 3271 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZIC3O60481 MTND5P24-201ENST00000438892 1767 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 OR5BR1P-201ENST00000524992 1330 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 OR51H2P-202ENST00000641424 3046 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZIC3O60481 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 AC126755.2-208ENST00000327792 462 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC138969.1-213ENST00000331436 462 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 RNU6-146P-201ENST00000384602 108 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 RNU6-253P-201ENST00000384730 105 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 MIR141-201ENST00000384975 95 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 RNU2-28P-201ENST00000410457 189 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 USP9YP33-201ENST00000412220 421 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC004022.2-201ENST00000413824 193 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 MTCYBP38-201ENST00000417160 1123 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms