Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AP004242.1-201ENST00000533701 349 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRTM2O43300 AC107016.1-201ENST00000550463 337 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AC023825.1-201ENST00000566704 1030 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRTM2O43300 MIR5685-201ENST00000579080 79 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AC126365.2-201ENST00000580630 379 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AC007687.1-201ENST00000602704 304 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AL354984.3-201ENST00000604803 325 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AC104763.3-201ENST00000613765 618 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AL021997.2-201ENST00000615674 271 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AC009269.6-201ENST00000621778 588 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 MIR7702-201ENST00000621931 59 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 AC039056.2-201ENST00000622261 511 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 FAM157B-203ENST00000639350 358 ntBASIC3.82□□□□□ -1.8
LRRTM2O43300 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
LRRTM2O43300 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRTM2O43300 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LRRTM2O43300 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRTM2O43300 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRTM2O43300 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
LRRTM2O43300 MIR449B-201ENST00000384995 97 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 MIR620-201ENST00000385232 95 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 MIR1303-201ENST00000408625 86 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC009237.5-201ENST00000414271 501 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AC008173.1-201ENST00000418901 264 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 MTND2P9-201ENST00000422293 931 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC073310.1-201ENST00000423226 1033 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC093698.1-201ENST00000423843 571 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AL050321.1-201ENST00000432363 400 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 EXTL2P1-201ENST00000446218 416 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 FABP3P2-201ENST00000453169 399 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AL133477.1-201ENST00000457472 514 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 GAPDHP36-201ENST00000480688 918 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 AC068305.1-201ENST00000497406 726 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AC093755.1-201ENST00000512950 1023 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 RN7SKP277-201ENST00000516895 283 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 SOD1P3-201ENST00000518682 454 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRTM2O43300 OR4C2P-201ENST00000530855 1064 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRTM2O43300 OR6C73P-201ENST00000546432 358 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRTM2O43300 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRTM2O43300 HSPE1P5-201ENST00000561489 272 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AC017100.2-201ENST00000584628 355 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AC069200.1-201ENST00000609511 323 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 AL445363.3-201ENST00000623080 671 ntBASIC3.81□□□□□ -1.8
LRRTM2O43300 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LRRTM2O43300 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRTM2O43300 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
LRRTM2O43300 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LRRTM2O43300 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 MTCO1P18-201ENST00000455518 1419 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
LRRTM2O43300 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM2O43300 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LRRTM2O43300 RSL24D1P1-201ENST00000404972 493 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 ZNF603P-201ENST00000405613 487 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 HMGB3P18-201ENST00000406327 590 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 UBE2V1P11-201ENST00000411559 285 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRTM2O43300 PSMA2P3-201ENST00000429685 675 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRTM2O43300 AL035246.1-201ENST00000433554 1255 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRTM2O43300 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRTM2O43300 AC000041.1-201ENST00000439655 175 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AL645931.1-201ENST00000439737 410 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 HMGB1P48-201ENST00000446155 598 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 AL133547.1-201ENST00000448546 220 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 GTF2IP12-201ENST00000456547 356 ntBASIC3.8□□□□□ -1.8
LRRTM2O43300 RPL7P49-201ENST00000471402 708 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms