Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRBV11-1A0A0K0K1C0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.5□□□□□ -1.85
TRBV11-1A0A0K0K1C0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRBV11-1A0A0K0K1C0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRBV11-1A0A0K0K1C0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.5□□□□□ -1.85
TRBV11-1A0A0K0K1C0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRBV11-1A0A0K0K1C0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL512646.1-201ENST00000269395 1077 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RNA5SP189-201ENST00000364920 115 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 Z98941.1-201ENST00000407764 100 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RN7SKP56-201ENST00000410513 331 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PTP4A1P5-201ENST00000420305 455 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PTP4A1P3-201ENST00000433661 420 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 SNORA71B-202ENST00000439232 272 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 UBE2V1P5-201ENST00000440070 405 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC004865.1-201ENST00000442276 1003 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC007000.2-201ENST00000442564 487 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RPS27P5-201ENST00000444247 244 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 HMGN2P7-201ENST00000456186 273 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC007537.2-201ENST00000472093 511 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AP001086.1-201ENST00000494882 321 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC078918.1-201ENST00000498515 228 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 UBE2CP3-201ENST00000502715 450 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 HIGD1AP3-201ENST00000515857 278 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 SNORA67.7-201ENST00000516664 135 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC233266.2-201ENST00000567067 528 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 MIR3158-1-201ENST00000583596 81 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL137849.1-201ENST00000604767 169 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC135178.6-201ENST00000605314 398 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC004775.1-201ENST00000607389 753 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AP003392.5-201ENST00000607857 415 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 STMN1P1-201ENST00000617809 440 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC079684.1-201ENST00000621405 437 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL356490.1-201ENST00000623079 479 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 MIR4278-201ENST00000636094 69 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 MTCO1P24-201ENST00000515438 1558 ntBASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRBV11-1A0A0K0K1C0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 ZNF285B-201ENST00000561698 1767 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RNU6-252P-201ENST00000363232 107 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RNA5SP322-201ENST00000363617 119 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 SNORD3H-201ENST00000384486 214 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 ATP5F1P3-201ENST00000397213 657 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RNU2-37P-201ENST00000410695 177 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC092745.2-202ENST00000411880 369 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RHEBP3-201ENST00000411920 351 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 GOT2P5-201ENST00000433995 546 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL513321.1-201ENST00000441175 761 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 Z77249.1-201ENST00000444622 1175 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 NPM1P49-201ENST00000448027 714 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RPL7P15-201ENST00000461190 712 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 RPL21P129-201ENST00000491732 478 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AP002812.1-201ENST00000495378 474 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC008802.1-201ENST00000519121 791 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC007991.1-201ENST00000522680 631 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 OR5D17P-201ENST00000531492 978 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC027104.1-201ENST00000563702 681 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 MIR5187-201ENST00000583479 76 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL034351.1-201ENST00000605288 668 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AC020978.9-201ENST00000624380 1141 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 AL590396.2-201ENST00000636511 1041 ntBASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV11-1A0A0K0K1C0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms