Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 SNORA75B-201ENST00000384053 137 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 Y_RNA.463-201ENST00000384271 102 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 RNU2-47P-201ENST00000410649 186 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 RNU2-22P-201ENST00000411266 212 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 RAC1P6-201ENST00000423911 575 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 RPL23AP64-201ENST00000469465 435 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 RN7SL809P-201ENST00000482040 297 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC092824.1-201ENST00000483524 576 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC016559.2-201ENST00000510759 359 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC104136.1-201ENST00000512969 394 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 RNU6-347P-201ENST00000516658 105 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 AC010624.4-201ENST00000597606 1351 ntBASIC6.31□□□□□ -1.4
PCDHB11Q9Y5F2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC016745.2-201ENST00000608834 3443 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 Y_RNA.80-201ENST00000362996 102 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 SNORD115-7-201ENST00000365306 82 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 RNU6-890P-201ENST00000384121 107 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 RNY1P14-201ENST00000384426 108 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 Y_RNA.556-201ENST00000384677 113 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AL136372.1-201ENST00000403060 228 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AL023284.3-201ENST00000407767 334 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC017035.1-201ENST00000411999 1115 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 CYCSP52-201ENST00000422857 310 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC093151.1-201ENST00000427711 313 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 GAPDHP59-201ENST00000435908 267 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 HMGB1P12-201ENST00000438594 598 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 RNU7-59P-201ENST00000459101 61 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 RNU6-635P-201ENST00000516651 102 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 RN7SL753P-201ENST00000581238 290 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 BNIP3P16-201ENST00000589779 534 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC004805.3-201ENST00000603178 310 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC004696.1-201ENST00000614345 607 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 MIR6085-201ENST00000618314 110 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AL357559.1-201ENST00000622228 274 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC025034.2-201ENST00000623264 286 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 AC005332.9-201ENST00000620266 2921 ntBASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHB11Q9Y5F2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 ZNF519P1-201ENST00000449011 1626 ntBASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 RNU6-379P-201ENST00000363813 104 ntBASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 RNU6-1293P-201ENST00000384077 107 ntBASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 Y_RNA.455-201ENST00000384230 98 ntBASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 MIR188-201ENST00000385034 86 ntBASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHB11Q9Y5F2 RNU6-328P-201ENST00000390887 106 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms