Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC009237.5-201ENST00000414271 501 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 C4BPAP2-201ENST00000428434 478 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC233982.1-201ENST00000451247 436 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC008280.2-201ENST00000455473 307 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 HMGN2P16-201ENST00000456802 261 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AL136097.1-201ENST00000456945 913 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC084198.1-201ENST00000477747 402 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC093663.2-201ENST00000484625 313 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RNF138P1-201ENST00000502765 546 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RN7SKP244-201ENST00000516513 307 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 CIR1P1-201ENST00000524055 1133 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC092747.2-201ENST00000545069 983 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 MIR378J-201ENST00000611988 109 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC090617.9-201ENST00000623751 147 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC017104.5-201ENST00000637647 639 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 MTND4P34-201ENST00000572715 1371 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 SNORD51.1-201ENST00000365405 77 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 SNORA62-201ENST00000365493 153 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AL049693.1-201ENST00000402760 611 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RNA5SP317-201ENST00000410176 116 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RNA5SP311-201ENST00000411290 116 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 H2AFZP6-201ENST00000444403 394 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 DNAJC19P1-201ENST00000455312 319 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 SYPL1P1-201ENST00000473622 768 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC073522.1-201ENST00000483312 377 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RPS3AP6-201ENST00000484430 795 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RPS4XP15-201ENST00000489210 795 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 TRBV12-2-201ENST00000489763 344 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC008565.1-201ENST00000509046 885 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RNA5SP315-201ENST00000516340 116 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 RNA5SP312-201ENST00000517068 116 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 NDUFA5P2-201ENST00000519723 344 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AP001207.1-201ENST00000524051 481 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 OR4A12P-201ENST00000530847 918 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC011468.4-201ENST00000603942 409 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AL590392.1-201ENST00000604960 446 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 OR2BH1P-201ENST00000608850 864 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC083809.1-201ENST00000615051 472 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AF001550.2-201ENST00000636643 217 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 CR381670.1-201ENST00000624291 1693 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC104446.1-201ENST00000613728 1321 ntBASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RHBDD3Q9Y3P4 AC005183.1-201ENST00000603687 1979 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC002546.1-201ENST00000588041 2504 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 255.2 ms