Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 GTF2IP8-201ENST00000560687 584 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 VN1R84P-201ENST00000593697 235 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC073091.2-201ENST00000603205 907 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC008782.1-201ENST00000603386 430 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC103881.1-201ENST00000603476 538 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 MLECP1-201ENST00000615893 709 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL121873.1-201ENST00000616013 524 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL158196.1-201ENST00000616786 434 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 ATE1-AS1-202ENST00000636460 506 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 ASNSP1-204ENST00000641977 1664 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC022893.2-201ENST00000564832 3296 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6-839P-201ENST00000363347 108 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6-621P-201ENST00000364752 109 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 MIR217-201ENST00000384817 110 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 TPT1P2-201ENST00000413105 503 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AL161449.1-201ENST00000414531 1199 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 RSL24D1P6-201ENST00000426934 401 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC244035.1-201ENST00000430042 390 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AL050321.1-201ENST00000432363 400 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 CBX1P4-201ENST00000439415 457 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 YWHAQP9-201ENST00000445891 512 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 RPL23AP71-201ENST00000470966 469 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC103987.1-201ENST00000473394 348 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC104763.1-201ENST00000475274 360 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 RNA5SP135-201ENST00000517019 125 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 COX6B1P6-201ENST00000522347 255 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AP001781.1-201ENST00000530977 207 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC007115.1-201ENST00000546853 234 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC007954.1-201ENST00000554198 494 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AP000811.1-201ENST00000603803 651 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AL590392.1-201ENST00000604960 446 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC008121.2-201ENST00000614647 523 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AL136981.2-201ENST00000617319 734 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC015726.3-201ENST00000624501 418 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC009951.1-201ENST00000623674 2614 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 AC018529.3-201ENST00000624212 2254 ntBASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX2IPQ9Y2D8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 AC011477.1-204ENST00000623416 1325 ntBASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6-984P-201ENST00000363236 109 ntBASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6-253P-201ENST00000384730 105 ntBASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6-1300P-201ENST00000391046 108 ntBASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 AL590762.2-201ENST00000395798 571 ntBASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 AL161909.1-201ENST00000397390 712 ntBASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 SNORA11-201ENST00000408789 128 ntBASIC4.98□□□□□ -1.61
SSX2IPQ9Y2D8 RNU4-25P-201ENST00000410569 230 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms