Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AC098824.1-201ENST00000453565 980 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 HMGB3P13-201ENST00000511263 607 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 RNA5SP230-201ENST00000517039 122 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AC008489.1-201ENST00000524271 483 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 OR4C2P-201ENST00000530855 1064 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 CYCSP39-201ENST00000565821 309 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 CYCSP45-201ENST00000402289 315 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 MTCO1P42-201ENST00000457379 726 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AC068724.1-201ENST00000487100 792 ntBASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.05□□□□□ -1.92
CHD8Q9HCK8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 RN7SKP111-201ENST00000410349 271 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 FTH1P6-201ENST00000430768 320 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 MTND4LP16-201ENST00000440828 295 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC023598.1-201ENST00000472521 361 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 OR4R3P-201ENST00000525084 838 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC005242.1-201ENST00000585658 438 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC058791.1-201ENST00000608412 3198 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 MIR133A2-201ENST00000347538 102 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 Y_RNA.295-201ENST00000364918 102 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 NPM1P25-201ENST00000429734 854 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC109458.1-201ENST00000508858 316 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC018797.3-201ENST00000513388 1241 ntBASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHD8Q9HCK8 SYT14P1-202ENST00000600441 1448 ntBASIC3.03□□□□□ -1.92
CHD8Q9HCK8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 VTI1BP4-201ENST00000427516 527 ntBASIC3.03□□□□□ -1.92
CHD8Q9HCK8 AC000374.1-201ENST00000434698 1745 ntBASIC3.03□□□□□ -1.92
CHD8Q9HCK8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 MTCYBP14-201ENST00000457471 715 ntBASIC3.03□□□□□ -1.92
CHD8Q9HCK8 FCF1P8-201ENST00000510322 597 ntBASIC3.03□□□□□ -1.92
CHD8Q9HCK8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 AC087888.1-201ENST00000550884 1254 ntBASIC3.03□□□□□ -1.92
CHD8Q9HCK8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 AC008759.1-201ENST00000589783 983 ntBASIC3.03□□□□□ -1.92
CHD8Q9HCK8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CHD8Q9HCK8 AC105402.1-201ENST00000413336 545 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AL591473.1-201ENST00000464297 313 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 TRBV12-2-201ENST00000489763 344 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 COX6CP8-201ENST00000522620 226 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AC010306.1-201ENST00000523223 1117 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AP003117.2-201ENST00000606010 545 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AP000255.1-201ENST00000610276 676 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AC107871.2-201ENST00000612894 502 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 AC243829.7-201ENST00000633081 225 ntBASIC3.03□□□□□ -1.93
CHD8Q9HCK8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
CHD8Q9HCK8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHD8Q9HCK8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.02□□□□□ -1.93
CHD8Q9HCK8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms