Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 Y_RNA.461-201ENST00000384263 103 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 Y_RNA.512-201ENST00000384518 102 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 Y_RNA.625-201ENST00000411256 107 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-CQ95604 Z99755.1-201ENST00000414048 380 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 BX682237.1-201ENST00000415016 335 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 GJA6P-201ENST00000415117 1042 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 RPLP0P7-201ENST00000416050 667 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AL035660.1-201ENST00000422041 222 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-CQ95604 AC009965.2-201ENST00000425328 970 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 GAPDHP58-201ENST00000438477 1006 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 SNORD127-201ENST00000458892 86 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 DYNLL1P5-201ENST00000467158 270 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 RN7SL799P-201ENST00000475891 298 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 RN7SL369P-201ENST00000477138 299 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 RPS10P20-201ENST00000494130 463 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-CQ95604 AC009901.1-201ENST00000506703 541 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 PGAM1P13-201ENST00000507497 754 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 RNU6-1092P-201ENST00000516955 87 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 IGHV4-55-201ENST00000520889 368 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-CQ95604 OR5D17P-201ENST00000531492 978 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-CQ95604 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-CQ95604 AC091078.2-201ENST00000557145 559 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AL133153.1-201ENST00000557756 303 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-CQ95604 AC087575.1-201ENST00000585087 229 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AC125232.2-201ENST00000592457 143 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AC006254.3-201ENST00000603353 884 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 EIF3FP1-201ENST00000613970 806 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AP005431.1-201ENST00000618479 319 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 AC018445.2-201ENST00000622987 260 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-CQ95604 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-CQ95604 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HLA-CQ95604 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.71□□□□□ -1.33
HLA-CQ95604 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HLA-CQ95604 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.71□□□□□ -1.33
HLA-CQ95604 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
HLA-CQ95604 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HLA-CQ95604 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
HLA-CQ95604 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HLA-CQ95604 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HLA-CQ95604 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
HLA-CQ95604 AL157777.2-201ENST00000258070 137 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 RNA5SP65-201ENST00000363166 119 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 RNA5SP514-201ENST00000363717 111 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 RNU6-450P-201ENST00000364654 107 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.71□□□□□ -1.34
HLA-CQ95604 Y_RNA.555-201ENST00000384673 110 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HLA-CQ95604 MIR1302-6-201ENST00000408466 90 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 RNU2-36P-201ENST00000410361 191 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-CQ95604 BX284632.2-201ENST00000421091 399 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AC234779.1-201ENST00000425910 285 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 HIGD1AP11-201ENST00000438361 280 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 DYNLT3P2-201ENST00000442517 295 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AL359955.2-201ENST00000445380 353 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 OR1H1P-201ENST00000448731 937 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-CQ95604 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-CQ95604 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-CQ95604 SNORA14.1-201ENST00000516113 141 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 Y_RNA.700-201ENST00000516806 100 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 RNA5SP34-201ENST00000516887 130 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 RNU6-685P-201ENST00000517088 95 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.71□□□□□ -1.34
HLA-CQ95604 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 RANP3-201ENST00000530970 276 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.71□□□□□ -1.34
HLA-CQ95604 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-CQ95604 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-CQ95604 AC044860.2-201ENST00000561005 179 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AC106785.4-201ENST00000569492 412 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms